Aerobe Test Clinical Microbiology – Flashcards

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Sterilization
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The killing or removal of all microorganisms in a material or on an object
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Disenfection
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The reduction of the number of pathogenic microorganisms to the point where they pose no danger or to inhibit their growth
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Antiseptic
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A chemical agent that can be safely used externally on living tissue to destroy microorganisms or to inhibit their growth
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Disenfectant
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a chemical agent used on inanimate objects to destroy microorganism.most do not kill spores
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Sanitizer
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A chemical agent, used typically on food handling equipment to reduce bacterial numbers so as to meet public health standards
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Bacteriostatic agent
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An agent that inhibs the growth of bacteria
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Germicide
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an agent capable of killing microbes rapidly, some effectively kill the microbe, while others only inhibit growth
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Bactericide
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an agent that kills bacterdia. most do not kill spores
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Viricide
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An agent that inactivates viruses
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Fungicide
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An agent that kills fungi
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Sporocide
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An agent that kills bacterial endospores and fungal spores.
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Denaturing proteins
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big mechanism in the how chemical agents work. Destroys the proteins tertiary shape-non covalent bonds are being broken

 

ex: fried egg-the protein is permenantly denatured

warmed milk-the protein can be reconfigured, only temporary denaturation

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Surfactant
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membran alteration-allows penetration by reducing the surface tension

 

ex: greasy skillet- soap (surfactant) binds to the grease and disoldges it

 

surfactant binds to a cell and the cell dies

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Effective Chemical Agents
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Heavy metal

Alochols

Phenol compounds (lysol)

Oxidizing agent (Hydrogen peroxide)

Soaps and detergents

Halogentated Compounds (iodine)

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Physical Agents
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Heat

Autoclave

Pasterurization

Filtration

Radiation

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Heat
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Moist-boiling (more effective-penetrates better)

Dry- flame

 

One of the most popular ways to destroy microbes

 

Exposure to boiling water for 10 mins is sufficient to destroy vegetative cells and eukaryotic spores.

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Autoclave
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moist heat+pressure

kills spores

 

all air must be removed from the chamber-pressure is needed to break the spores.

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pasteurization
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invented by pasteur to destroy microbes that caused wine to sour-does not acheive sterility.

kills salmonella and mycobacterium

flash method-heated at high temp/short time

holding method- heated at lower temp/longer time

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UV radiation
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quite lethal in destroying microbes, but will not penetrate through glass, water or dirt films
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Ionizing radiation

 

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excellent sterilizing agent because of its ability to penetrate deep into objects

 

-electrons are released from the atoms creating ions

 

will destroy bacterial endospores and both prokaryotic and eukaryotic vegatative cells

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Filtration
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can be used to sterilize substances that are destroyed by heat (drugs, serum vitamins, sucrose)

 

helpful in making vaccines

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Antibiotics
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anything bacteria produce that will kill or inhibit another organism

-anything of microbial origin

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Synthetic drugs
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from the minds of chemists-derived from parts of antibiotics from organisms
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Selective Toxicty
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ability to targe a particular organism or group of organisms without harming the host-knowing the difference from good and bad
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Narrow Spectrum of activity
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targets a single organism
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Summary of targets

 

-works in five ways

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1. Inhibition of cell wall synthesis

2. Disruption of cell membrane function

3. Inhibition of protein synthesis

4. Inhibiton of nucleic acid synthesis

5. Action as antimetabolites

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Penicillin
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beta lactem ring

binds to enzymes involved in make the cross link in the cell wall-weakening the cell wall, the pressure on the inside of the cell is enough to destroy the cell.

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Side effects
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toxicty

allergy

disruption of microflora

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Chemotherapeutic index
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max tolerable dose/min amount needed to kill an organism
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Chromosomal drug resistance
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a gene has mutated and has an altered protein, the antibiotic doesnt recognize the protein

 

(specific resistance)

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Plasmid borne drug resistance
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a single plasmid may carry the resistance gene for many products.

plasmids are scattered all throughout the cytoplasm

much more worrysome

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Limiting drug resistance
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-effective drug concentrations (improper dosages)

-restricting drug prescriptions (many prescriptions are given unnecessarily)

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Disk Diffusion Method
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great 1st step in determining microbial sensitivites.

place disks of antibiotics into culture. done most often, but takes time.

culture could be classified as sensitive, intermediate or resistant.

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Dilution Method
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finds the minimum amount of antibiotic needed to inhibit growth. Place dilutions of antibiotics into broth cultures.
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Serum killing power
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anaylyzes antibiotic resistance-kirby bauer method
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Ideal antimicrobial attributes
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Solubility

Selective Toxicity

Stable toxicity level

Allergenicity

Tissue Stability

Resistance Aquisition

Shelf life

Cost

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Cell Wall targets
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Penicllins

Cephalosporins

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all have the beta lactem rings

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Cell membrane targets
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polymyxins-most come from Bacillus sp.
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Protein synthesis inhibition
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most of these products are purifed from Streptomyces sp.
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Antimetabolites
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interfere with metabolic pathways-inhibit normal metabolism
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Molecular Mimicry-Folic acid synthesis
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biosynthetic pathway

sulfa drugs mimic the intermediate in the production of folic acid-then stops production

 

tricks the cell into thinking it has the specifc part it needs but then stops-meaning the cell is missing that vital part to surive so it dies off.

 

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Metagenomics
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technique used to examine dna from cells you cant grow in a lab
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Pathogenicty
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ability of an organism to cause disease
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Pathogenic microbiolgy
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concernce with organsims causing diseases
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Normal Flora
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beneficial

those organisms that we always have

occupies sites on our bodies so the bad bacteria cant bind

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Resident flora
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with us all the time
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Transient flora
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may colonize for a few weeks, and then leaves

 

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Opportunistic infection
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bacterium that is usually apart of our normal flora and usually causes no harm. however if our body is compromised it can cause disease

 

candida albicans-yeast infections due to low number of lactobacillus.

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Infection
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growth of microbes in tissue, may or may not cause harm
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Infectious disease
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causes damage
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Communicable disease
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transmitted from person to person
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Non-communicable disease
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transmitted from object to person
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Resevoir
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describes where an organism lives. every organism has a resevoir and the resevoir must be able to withstand that organism
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Carrier
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houses an organism
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Healthy carrier
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no s/s of disease ever present
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incubatory carrier
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initial stages of disease, before s/s are noticed
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Convalescent Carriers
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had the disease, recoverd, no s/s, but will continue to shed the organism-could still be contagious
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Latent infections
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doesnt follow the normal progression, organism may be carried for year before symptoms appear

-cold sores

-leprocy

-tuberculosis

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How the organism causes disease
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-organism must get into the body, bind and replicate

-organism goes thru and incubation period

-clinical symptoms begin to show up

-recovery period

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Ways bacteria cause disease
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Invasivion

Toxin production

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Toxin
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molecule released by the cell
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Endotoxin

 

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(LPS)

only produced by gram (-) bacteria

when bacteria are lysed, endotoxin is released which causes a spike in fever

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Exotoxin
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very broad-many different types, but each kind has a  specific mode of action (neurotoxins, enterotoxins)

 

gram (-) bacteria has endotoxins and exotoxins

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Toxoid
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chemically inactivated version of an exotoxin, still recognized by the body-body can build and immunity against it---used in vaccines

 

impossible to make toxoid out of endotoxin

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Non-specific (innate) immunity

 

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what we're born with

requires no previous exposure to organism

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ex; lysozyme, skin, cilia, phagocytosis

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Complement proteins

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form of innate immunity

~20 proteins binds to surface of cell and punches holes in the suface

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Opsonin
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puts a red flag on the cell to enhance the ability of the phagocytes to recognize the intruder

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is considered to be a specific and a non specific form of immunity

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Antibody
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molecule that recognizes an antigen

made by a b-cell

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Antigen
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foreign molecule that elicts an immune response
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Specific Immunity
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requires previous exposure

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includes b and t cells

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b-cells
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recognizes intruder and makes an antibody for it
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t-cells
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responsible for cell-mediated immunity

useful for organisms that invade cells

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anti-codon
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series of any thre nucleotides on tRNA that binds to the codon on the mRNA
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Start Codon
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AUG-methionine
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Stop Codons
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UAA
UGA
UAG
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Wobble position
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3rd position in a codon

it doesnt usually matter what nucelic acid is in this spot because it will still attract the same tRNA and code the same amino acid

;

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Inosine
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can bind w/ A,C,G, and T

lacks base pairing rules

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Translation
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initiation

elongation

termination

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Initiation

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30s ribosome binds to rbs

the first tRNA binds

50s ribosome binds

p, a, and e site are now present

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Elongation
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for elongation to occur, the a site must be empty

incoming tRNA's enter thru the empty a site

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Translocation
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shifting of the entire ribosome down one codon
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Termination
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starts when the a site is over a stop codon

there is nothing to bind to, so the polypeptide chain gets released by release factors and the ribosome detaches from the mRNA and tRNA

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Transcriptional Control
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form of gene regulation

if the gene is needed the repressor falls off

if a gene is on, you make the protein, if its off, you dont

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