Final Practical Test Questions – Flashcards
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| What is the purpose of viral transport media? |
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| The purpose of viral transport media is to keep the human cell culture alive in order to support the virus and keep it alive for identification |
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| What is contained in the viral transport media? |
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| The transport media contains proteins, sugars and salts to keep the cells alive. |
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| How does a shell vial differ from a cell culture used in diagnostic virology? |
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| The shell vial differs from the cell culture in that the shell vial is a mixture of the cell culture and immunofluorescence. The shell vial contains a layer of cell line at the bottom, and it allows for rapid ID via immunofluorescence by utilizing a high speed centrifuge to increase the rate of viral attachment. |
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| In latex agglutination testing, what coats the latex particles? |
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| In latex agglutination an antibody or an antigen can coat the latex particle, it depends whether you are searching for an antibody or an antigen |
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| detection molecule in ELVIA |
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| Beta galactosidase |
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| detection molecule in EIA/ELISA |
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| chromogen |
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| detection molecule in IFA/DFA |
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| monoclonal antibody with fluorescent molecule attached |
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| detection molecule in Chemilluminescence |
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| luminol |
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| detection molecule in Amplification techniques |
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| fluorescence, luminal, radioactive material, or chromagens |
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| 5. A patient has a positive HIV screen. The western blot confirmatory test was negative. What may have caused this discrepancy |
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| The western blot could have been negative because the patient hasn’t seroconverted yet, or the western blot was searching for HIV 2 and you were testing with an HIV 1 sample |
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| An HIV RNA PCR test is ordered for the patient. What additional information will the molecular test give the physician? |
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| The PCR will give the physician information about viral load or the amount of virus present. |
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| What is Latex Agglutination |
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| Qualitative and semiquantitative w/end point titres on Serum |
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| ASO – anti-streptolysin O latex agglutination for? |
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| Group A strep detection |
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| Cryptococcal Antigen Latex Agglutination on which type of specimen? |
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| CSF or serum |
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| Monospot (EBV) Latex Agglutination for? |
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| Heterophile Ab |
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| What is Flocculation? |
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| Clumping of visual charcoal particles |
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| RPR – Rapid Plasma Reagin Ab test on and for? |
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| Plasma or serumScreening test for syphilis |
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| VDRL – Venereal Disease Research Laboratory on? |
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| CSF |
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| EIA is a.. |
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| Ag-Ab chromogen reaction on nitrocellulose strip |
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| EIA with what sample? |
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| NP Wash or Swab |
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| Pneumococcal Ag test on which sample? |
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| Serum or CSF |
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| Legionella Ag on which sample? |
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| Urine |
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| Mycoplasma pneumoniae testing for what antibody in which specimen? |
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| IgM in Serum |
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| Rapid Influenza A&B on which specimen? |
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| NP wash or swab |
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| Rapid HIV (EIA) on which specimen? |
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| Serum or whole blood |
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| ELISA can be |
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| automated or manual with spec used for C. diff toxin |
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| DSX can test for? |
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| Mumps, Measles, Rubella, VZV, EBV, CMV, Herpes, Toxoplasma (serum) |
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| chemilluminescence |
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| Luminol when mixed with oxidizing agent |
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| As electrons return to their ground state... |
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| excess energy is liberated as a photon of visible blue light |
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| chemilluminescence measured on |
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| photometer |
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| Hepatitis chronic panel |
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| 1. Hep BSAg 2. Hep C Ab |
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| Hepatitis acute panel |
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| 1. Hep BSAg 2. Hep C Ab 3. Hep A IgM 4. Hep BC IgM |
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| HBsAG -, anti-HBc -, anti-HBs - = |
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| susceptible to hep B infection |
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| HBsAG -, anti-HBc +, anti-HBs + = |
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| immune from past infection |
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| HBsAG -, anti-HBc -, anti-HBs + = |
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| immune from hep B vaccination |
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| HBsAG +, anti-HBc +, IgM anti-HBc +, anti-HBs - = |
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| acute infection |
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| HBsAG +, anti-HBc +, IgM anti-HBc -, anti-HBs - = |
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| chronic infection |
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| HBsAG -, anti-HBc +, anti-HBs + = |
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| (1) recovering from acute (2) immune and anti-HBs not detectable (3) susceptible to false-positive anti-HBc or (4) chronically infected and HBsAG not detectable |
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| HIV Ab screen can be done via |
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| ELISA, rapid EIA or Chemilluminescence |
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| HIV & West Nile Confirmatory Test |
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| western blot |
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| Immunofluorescence can be |
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| direct or indirect |
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| FTA – Fluorescent Treponema Antibody confirms |
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| RPR |
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| Respiratory Panel contains |
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| Adenovirus, Influenza A&B, Para influenza 1,2 & 3, RSV |
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| Phenotypic |
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| unique physical characteristics that can be observed |
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| Immunologic |
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| unique antigens |
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| Serologic |
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| indirect identification targeting unique antibodies |
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| Molecular |
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| unique nitrogenous base sequences |
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| Watson & Crick - 1953 |
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| Molecular Structure of Nucleic acids |
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| Kary Mullis - 1983 |
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| PCR (Polymerase Chain Reaction) |
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| Steps in PCR (5) |
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| Extraction Denaturation Primer anneal Extension Detection of products |
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| PCR amplification in a |
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| thermal cycler |
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| Real-time polymerase chain reaction |
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| amplify and simultaneously quantify a targeted RNA or DNA sequence. The amplified DNA is detected as the reaction progresses in real time, a new approach compared to standard PCR, where the product of the reaction is detected at the end. |
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| Method for detection in Real Time-PCR |
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| sequence-specific probes consisting of oligonucleotides labeled with a fluorescent reporter |
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| Abbreviations used for real-time PCR |
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| RTQ-PCR, Q-PCR or qPCR |
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| Real-time reverse-transcription PCR is denoted as |
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| qRT-PCR, RRT-PCR,or RT-rt PCR |
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| acronym RT-PCR commonly denotes |
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| reverse-transcription PCR and not real-time PCR |
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| SDA |
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| Strand displacement amplification |
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| NASBA |
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| Nucleic acid sequence based amplification |
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| TMA |
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| transcription mediated amplification |
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| LCR |
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| Ligase chain reaction |
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| Cepheid Gene Xpert |
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| PCR detection of MRSA from nasal swabs |
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| HybridizationUsed for speciation of AFB |
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| genprobe or labeled probe |
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| Frederick Sanger – The Nobel Prize in Chemistry 1980 |
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| DNA sequencing |
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| Human Genome Project |
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| 3 billion base pairs in 23 chromosomes Only 1.5% of the human genome codes for proteins 2003 |
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| Gene sequencing of Actinomycetes |
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| Micro seq 500™ |
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| HCV genotype testing is used to determine |
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| required length and potential response to interferon-based therapy |
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| Microarray Technology |
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| Chip w/oligonucleotide DNA probes Intensity of hybridization is determine using imaging processing software |
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| Virion |
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| complete viral particle comprised of genetic material & the capsid |
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| virus innfects cells by |
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| lytic or latent |
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| structures of virus |
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| enveloped, helical, icosohedral |
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| genome can be |
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| ssRNA, dsRNA, dsDNA or ssDNA |
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| Positive sense 5’ – 3’ |
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| Viral RNA serves as mRNA for translation |
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| Negative sense 3’ – 5’ |
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| Virus provides RNA polymerase to convert to positive sense RNA |
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| Rotavirus found in |
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| stool |
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| enterovirus found in |
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| stool CSF, NP or throat swab |
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| Respiratory panel done on |
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| patient specimen or patient infected mixed cell line (r-mix) |
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| H glycoproteins |
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| help attach |
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| N glycoproteins |
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| help leave |
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| Syncytia |
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| fusion of cells |
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| RSV |
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| Respiratory Syncytial Virus |
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| RSV test |
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| EIA |
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| oncovirus |
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| triggers a cell to become cancerous, HIV |
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| seroconversion |
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| indeterminate results |
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| JCV & BKV |
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| Transplant patients |
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| JCV & BKV testing on |
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| Urine, Plasma, CSF or Tissue |
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| BSL 4 organisms |
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| Marburg Virus and Ebola Virus |
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| Prions |
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| protein particles that can destroy nerve tissue |
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| Creutzfeldt-Jacobs Disease |
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| mad-cow, caused by prion |
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| It is best to collect specimens for viral isolation during |
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| first few days of illness, during the febrile, acute (IgM) period |
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| Blood for virus collection to |
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| rule out viremia |
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| Indirect viral detection |
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| 2 antibodies |
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| SEM |
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| scanning electron microscope |
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| TEM |
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| transmission electron microscopy |
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| direct detection |
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| EM |
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| examples of CPE |
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| synica, inclusions, lysis, enlargement |
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| Direct - DFA |
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| Tagged MCAb + Virus infected cell Respiratory panel, CMV, HSV, VZV |
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| Indirect IF |
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| Tagged Ab + MCAb + Virus infected cell |
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| Rapid cell culturew/fluorescent staining used on which vial with what virus |
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| shell vial with CMV |
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| ELVIS |
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| enzyme linked virus inducible system |
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| Whats in an ELVIS |
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| Hamster Kidney Cells w/Beta galactosidease gene |