Microorganisms – Flashcards

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Heliobacter pylori
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Bacteria(Domain);

Proteobacteria (Phylum);

Epsilon Proteobacteria (Class);

Campylobacterales (Order);

Helicobacteraceae (Family);

Helicobacter (Genus)


gram-negative, causes stomach ulcers

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Esherichia coli
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Bacteria (Domain);

Proteobacteria (Phylum);

Gamma Proteobacteria (Class);

Enterobacteriales (Order);

Enterobacteriaceae (Family);

Escherichia (Genus)


aerobic, gram negative

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Staphylococcus aureus
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Domain: Bacteria

Kingdom: Bacteria

Phylum: Firmicutes

Class: Cocci

Order: Bacillales

Family: Staphylococcaceae

Genus: Staphylococcus


causes staph, gram positive

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Methanothermobacter
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Archaea;

Euryarchaeota;

Methanobacteria;

Methanobacteriales;

Methanobacteriaceae

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 Magnetospirillum magneticum
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Bacteria;

Proteobacteria;

Alphaproteobacteria;

Rhodospirillales;

Rhodospirillaceae;

Magnetospirillum


gram negative, iron and nitrate reduction

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Flavobacterium
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Bacteria; Bacteroidetes/Chlorobi group;

Bacteroidetes;

Flavobacteria;

Flavobacteriales;

Flavobacteriaceae

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Micrococcus
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Bacteria;

Actinobacteria;

Actinobacteria (class);

Actinobacteridae;

Actinomycetales;

Micrococcineae;

Micrococcaceae

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Caulobacter crescentus 
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Bacteria

Proteobacteria

Alphaproteobacteria

Caulobacteralus

Caulobacteraceae;

Caulobacter

gram negative, marine organism

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Streptococcus pyogenes
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Kingdom: Bacteria Phylum: Firmicutes Class: Bacilli Order: LactobacillalesFamily: StreptococcaceaeGenus: Streptococcus 

 

gram-positive flesh eating bacteria

 

 

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Pyrococcus (horikoshii)
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Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae



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Allivibrio fischeri

 

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Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio; Vibrio fischeri

 

gram-positive, quorum sensing

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Aspergillus (nidulans)
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Eukaryota; Fungi; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiales; Trichocomaceae
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Streptococcus pneumoniae
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Domain:Bacteria

Phylum:Firmicutes

Class:Cocci

Order:Lactobacillales

Family:Streptococcaceae

Genus:Streptococcus

Species:S. pneumoniae

gram-positive, causes pneumonia 

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Saccharomyces cerevisiae
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Kingdom:Fungi

Phylum:Ascomycota

Subphylum:Saccharomycotina

Class:Saccharomycetes

Order:Saccharomycetales

Family:Saccharomycetaceae

Genus:Saccharomyces

Species:S. cerevisiae

yeast used in baking

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Thiobacillus denitrificans
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Domain: Bacteria;

Phylum: Proteobacteria;

Class: Betaproteobacteria;

Order: Hydrogenophilales;

Family: Hydrogenophilaceae;

Genus: Thiobacillus


 Gram-negative, obligately chemolithoautotrophic, sulfur oxidizing

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Gallionella ferruginea 
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Bacteria; Proteobacteria; Betaproteobacteria: Nitrosomonadales; Gallionellace

 

iron-oxidizing chemolithotrophic

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 Brocadia anammoxidans
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Domain: Bacteria

Phylum: Planctomycetes

Class: Planctomycetacia

Order: Planctomycetales

Family: unclassified Planctomycetales

Genus: Candidatus Brocadia


anarobically oxidize ammonia to dinitrogen gas

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Aquifex aeolicus
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Bacteria; Aquificae; Aquificae (class); Aquificales; Aquificaceae; Aquifex 

 

most extreme thermophilic bacteria

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Rickettsia rickettsii
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Bacteria; Proteobacteria; Alpha Proteobacteria; Rickettsiales; Rickettsiaceae; Spotted fever group

 

causes rocky mountain spotted fever

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Bradyrhizobium japonicum
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Domain: Bacteria, Phylum: Proteobacteria, Class: Alphaproteobacteria, Order: Rhizobiales, Family: Bradyrhizobiaceae

 

gram-negative nitrogen fixing bacteria

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Methylobacterium
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Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae

 

use methanol and methylamine as well as C2, C3 and C4 compounds to grow

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Salmonella enterica
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Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae

 

 cause systemic infections and typhoid fevers

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Psuedomonas aeruginosa
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Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae

 

opportunistic pathogens

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Chromobacterium violaceum
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Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Neisseriaceae

 

 facultative anaerobic, oxidase-positive, glucose-fermenting, non-lactose-fermenting, Gram-negative bacillus, only infect humans through intake of contaminated food or water

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Nitrosomonas europaea
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Domain: Prokaryota
Phylum: Proteobacteria
Class: Beta Proteobacteria
Order: Nitrosomonadales
Family: Nitrosomonadaceae
Genus: Nitrosomonas
Species: N. europea

ammonia-oxidizing. 
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Neisseria gonorrhoeae
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Domain: Bacteria

Phylum: Probacteria

Class: Beta Probacteria Order: Neisseriales

Family: Neisseriaceae

 

gram-negative, causes gonorrhea

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Geobacter sulfurreducens
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Bacteria ; Proteobacteria ; Deltaproteobacteria ; Desulfuromonadales ; Geobacteraceae
 
gram-negative,  oxidize organic compounds and couple that to the reduction of metals.
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Myxococcus fulvus
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Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae
 
Gram-negative, spore-forming, chemoorganotrophic, obligate aerobes
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Bdellovibrio bacteriovorus
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Bacteria; Proteobacteria; Deltaproteobacteria; Bdellovibrionales

 

parasite to other gram-negative bacteria

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Bacillus anthracis
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Bacteria (domain); Firmicutes (phylum); Bacilli (class); Bacillales (order); Bacillaceae (family); Bacillus (genus)

anthrax

gram-positive, 

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Lactobacillus reuteri
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Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus

 

gram-positive, heterifermentatic lactic acid bacterium 

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Deinococcus radiodurans
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Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus

 

radiation resistant

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Thermotoga maritima
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Bacteria; Thermotogae; Thermotogae (class); Thermotogales; Thermotogaceae

 

active at all temeratures

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Chlorobium tepidum
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Domain: Bacteria; Phylum: Chlorobi; Class: Chlorobia; Order: Chlorobiales; Family: Chlorobiaceae

 

anaerobic phototrophic bacterium that is also a thermophile

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Halobacterium salinarum
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Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium

 

halophilic

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Haloferax volcanii
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Archaea, Euryarchaeota, Halobacteria, Halobacteriales, Halobacteriaceae, Haloferax

 

halophile in extreme saline environments

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Methanobrevibacter Smithii
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Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter

 

methanogenic

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Methanospirillum hungatei
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Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanospirillaceae

 

methanogen used to treat organic wastes

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Methanosarcina barkeri
 
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Archaea : Euryarchaeota : Methanomicrobia : Methanosarcinales : Methanosarcinaceae 

 

 

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Thermoplasma volcanium
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Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Thermoplasmataceae

 

thermi acidophile

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Nanoarchaeum equitans
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Archaea; Nanoarchaeota

 

parasitic, hydrothermophilic

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Geogemma barossii
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Domain: Archaea

Phylum: Crenarchaeota

Class: Thermoprotei

Order: Desulfurococcales

Family: Pyrodictiaceae

Genus: Geogemma

Species: G. barossii


hyperthermophile

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Batrachochytrium dendrobatidis
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Eukaryota; Fungi/Metazoa group; Fungi

 

very simple fungi

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Candida dubliniensis
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Fungi, Ascomycota, Saccharomycetes, Saccharomycetales, Saccharomycetaceae, Candida,

 

yeast pathogen

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Penicillium notatum
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Eukaryota; Fungi/Metazoa group; Fungi; Ascomycota; Pezizomycotina; 

 

post-harvest pathogens

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Balamuthia mandrillaris
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Eukaryota; Lobosea; Euamoebida; Amoebidae

 

simplest eukaryotes

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Euglena gracilis
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Eukaryota; Protista; Pyrrophyta; Euglenoidea; Euglenales; Euglenaceae
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