Organic Chemistry 1 Lab Final

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melting point for a pure substance
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sharp range: 1-2°C
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melting point for an impure substance
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broad range: 5-15°C
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what happens to melting points for mixed substances?
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it's lowered and broaden because the foreign substance disrupts the crystal lattice of the other one, which lowers the energy required to melt the solid
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eutectic point
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the limit to how far the melting point can be depressed for a mixed substance
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melting point apparatus
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MEL-TEMP
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how much substance should be put in a capillary tube when taking a melting point?
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1-2 mm
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determining the melting point of an unknown using mixed melting points
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perform a fast and slow melting point in order to pinpoint the range and compare it to the known melting point range of one of the components. if the melting point range doesn't get lowered or broadened, then can identify it based on the unknown.
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distillation
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purification technique based on the boiling points of liquids. a liquid is vaporized to a gas, which condenses back into a liquid called the distillate.
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distillate
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the liquid that forms during distillation after the original liquid is vaporized and then condensed, which is collected and measured
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how does the composition of a liquid mixture compare to the composition of its vapor?
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the vapor pressure will be richer in the substance with the lower b.p. than the one with the higher b.p., but still contains a significant amount of the higher b.p. substance. this makes complete separation of a liquid by simple distillation impossible
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when is it possible to get a fair result from simple distillation?
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when the substances' b.p. differ by more than 110°C
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fractional distillation
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uses multiple vaporization/condensation cycles to purify a liquid. -insert an air condenser column packed with stainless steel sponge (many vaporization/condensation cycles occur going up the column) -spike in graph signifies the substance with the lower b.p. is removed from the vapor -obtains a better result than simple distillation
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how many samples are usually collected for distillation?
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10-15 in order to make a smooth graph of temperature vs. cumulative volume
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refractive index (RI)
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temperature and wavelength dependent, which quantifies the fact that light travels at different velocities in air and water.
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refractometer
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used to measure the refractive index, R(f). light is sent through a prism that's in contact with the sample, which influences how much the light is refracted. a sensor detects the refraction and obtains an R(f) value to help identify a substance based on known R(f)
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Height of a Column Equivalent to one Theoretical Plate (HETP)
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reports the column efficiency in terms of the number of vaporization/condensation cycles for fractional distillation (cm/plate) -low HETP means a more efficient column
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what is one Theoretical Plate?
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1 vaporization/condensation cycle (longer columns have more TP's)
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calculating % of a substance present from RI data
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obtain RI values through normalized sodium D line. (your fraction RI - known RI of other substance) ÷ (known RI of substance - known RI of other substance)
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definition of boiling
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the vapor pressure equals the ambient pressure (atm)
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Raoult's Law
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applies to miscible solutions that do not interact P(tot)=X(a)P(a) +X(b)P(b)
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vigreux column
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modification of the air condensing column with downward pointing indentations to increase the surface area without increasing the column length
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azeotropes
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mixtures with constant b.p. that can't be separated. behavior is attributed to slight attractions and repulsions between molecules. vapor pressure is higher or lower than predicted by Raoult's Law -minimum b.p. diagram: shows repulsion -maximum b.p. diagram: shows attraction
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molecular modeling (computational chemistry)
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calculates and models 3D properties of molecules by derivations: 1. quantum mechanics 2. molecular modeling
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molecular mechanics
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uses empirical force field models (mathematical functions that describe the potential energy of a system) and is based on Newtonian mechanics. 1. inexpensive 2. scalable 3. can model large systems
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molecular mechanics equation
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E(strain)=E(stretch)+E(angle)+E(torsion)+E(oop)+E(VdW)+E(dipole) -E(stretch), E(angle), E(torsion), E(VdW) affect it the most -want to minimize E(strain)
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E(strain)
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energy calculated from mechanical force fields
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E(angle)
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energy calculated from expanding or compressing bond angles away from the most stable
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E(torsion)
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energy calculated from the staggered derivations throughout ring flipping
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E(VdW)
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energy calculated from electron repulsions that are due to the overlap of nonbonding atoms in close proximity to each other
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major limitation of molecular mechanics
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a local minimum might be found instead of a global minimum which can be seen in rotational energy (ROT-E) projections
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rotational energy (ROT-E) projections
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represent the rotations of a molecule graphically (energy vs. angle) -global minimum: lowest energy conformation -local minimum: depends on where the starting structure corresponds to the graph
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why was molecular mechanics developed
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in order to find the lowest energy conformation of a given molecule or to compare the energies of several conformations of the same molecule -doesn't calc thermodynamic energy, electron distribution, dipole moments, or molecular orbitals
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quantum mechanics
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calculates and models properties of molecules using complex derivations (e.g. Schrödinger's equation) 1. expensive 2. not scalable 3. breaks down for larger molecules
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what is a force field?
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an empirical mathematical function used to describe the potential energy of a system of molecular particles
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molecular mechanics computer program
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PCModel
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crystallization
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dissolving a solute into a hot solvent (must be miscible; s→l→c) and then observing the solution as it cools to see if it separates back out of solution -wasteful and never meets the theoretical yield -successful only when minimal amounts of impurities
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solute
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a dissolved substance
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solvent
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the dissolving medium
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mother liquor
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the resulting solution from filtration in recrystallization which contains the solvent and any impurities
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an ideal solute for recrystallization
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low solubility at room temperature and high solubility at the solvent's b.p. -makes the solubility curve steep -follow \"like dissolves like\"
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step in picking a solute for recrystallization
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-difference in solubility in cold and hot solvent -easily removed by drying -not toxic or flammable (safety) -not reactive with the solvent -liquid range near room temperature
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how to remove an impurity in recrystallization that's soluble at all temperatures
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don't have to worry because it goes into the mother liquor after filtration
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how to remove an impurity in recrystallization that's insoluble at all temperatures
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can be removed with hot filtration using fluted filter paper, which traps the impurities while allowing the pure solute to pass through. then, vacuum filtration is performed to dry out the remaining crystals.
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how to remove an impurity in recrystallization that has similar solubility as the solvent
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the ease of removing it depends on the amount
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how to remove an impurity in recrystallization that's colored
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can be removed using charcoal (Norit)
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why is recrystallization employed?
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doing two or more crystallizations to improve the purity of the obtained crystals or when there is a lot of impurity relative to the solvent
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what happens if you cool the solution down too quickly during recrystallization?
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the impurities might get trapped in solution because it will become supersaturated
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semi-microscale recrystallization
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main method used for crystallization. an Erlenmeyer flask is used to dissolve material and a vacuum filtration is used to filter crystals. It is used when the weight of the solid is more than 0.1 g
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microscale recrystallization
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used when the amount of product is less than 0.1 g. a craig tube is used instead of an Erlenmeyer flask and a centrifugation filters the solution which minimizes the number of transfers. this results in a greater yield of crystals.
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what would happen if a hot saturated solution were filtered by vacuum filtration using a Hirsch funnel?
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some of the crystals would precipitate out and crystallize which would cause the funnel to get clogged. the rest of the solution would not be able to get filtered
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what to do if no crystals form
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1. induce crystallization by scratching the glass (provides a spot for them to form) or using seed crystals 2. the material might have separated out as a liquid if there b.p. of the solvent > the m.p. of the solute.
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how to fix oiling out during recrystallization
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use a solvent with a lower b.p. or add more solvent
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liquid-liquid extraction
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transferring a solute from one solvent into another -done with a separatory funnel -recrystallization can remove small amounts of impurities
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ideal extraction system for liquid-liquid extractions
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substances should: 1. be unreactive to each other 2. be virtually immiscible 3. differ in density so gravity can separate them 4. be non-flammable 5. differ in polarity distinctly so they dissolve in a series of dissimilar substances 6. be non-toxic 7. one should be volatile so it can be easily removed by boiling
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what can be done to help purify an organic substance during liquid-liquid extraction?
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a water wash which uses water to extract water soluble and low molecular weight impurities to help purify the substance
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partition coefficient (K)
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the solute distributes itself between the two solvents in liquid-liquid extraction and K is the ratio of the concentration of the solute in each of the solvents K=C₂/C₁
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what does a large K mean?
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that multiple extractions don't need to be done, but it's always better to use several small partitions of the second solvent than to perform one large one
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what happens if the substances are mixed too vigorously during liquid-liquid extraction?
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CO₂ pressure increases sharply and when venting, some of the liquid will shoot out of the separatory funnel
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solid phase extraction (SPE)
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used to perform separatory reactions in which new compounds are prepared.
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SPE column
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constructed from the body of a plastic syringe that is packed with a sorbent. a frit is inserted below and above the sorbent to support it in the column
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sorbent
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materials that can both absorb (attract to its surface by physical attraction) or absorb (penetrate into the material like a sponge)
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frit
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a substance used to make porcelain or glazes (used in SPE columns)
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C₁₈ column
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SPE column used in lab. the sorbent has a 18 C chain branching off of an silica molecule to make it non polar. -stationary phase: C₁₈ reversed-phased silica -mobile phase: brewed tea
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reverse phase chromatography
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the polar substances come off first and the relatively non polar substances will be retained (i.e. caffeine) in an SPE column -condition the column with polar substances -pass caffeine through -flush the caffeine from the column with EtOAc
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sublimation
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purifies the leftover solid caffeine following reverse phase chromatography -caffeine is warmed enough until the vapor pressure is high enough for vaporization and then condensation occurs on a cooled surface.
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why is the sublimation step in the SPE lab hooked up to a vacuum?
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because many solids do not develop enough vapor pressure at sea level to be purified. it also prevents thermal decomposition of the caffeine.
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sublimation vs. crystallization purification
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sublimation is a faster technique, but it's not as selective, which is why crystallization is more widely used.
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different ways to decaffeinate coffee
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1. extract with CH₂Cl₂: CH₂Cl₂ is somewhat toxic 2. use supercritical CO₂: high temp and pressure 3. solid phase extraction (SPE): green chemistry
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thin layer chromatography (TLC)
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the separation of nonvolatile compounds of a mixture by differential elution on an absorbent -stationary phase: TLC plate (polar silica and glass) -mobile phase: solvent
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eluent
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the chamber containing the solvent with the filter paper in TLC
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what does running or developing the TLC plate mean?
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when the solvent ascends the TLC plate by capillary action, which partitions the sample between the mobile and stationary phase
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rate of elution R(f)
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helps determine the relative polarities of the solutes (should always be below 1) R(f) = solute (spot) distance / solvent distance
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do polar substances travel more or less than non polar substances on a TLC plate?
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less because they are attracted to the polar silica. non polar substances have less affinity for the plate and dissolve into the solvent more readily.
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different ways to visualize a developed TLC plate
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1. UV indicator 2. iodine or vanillin 4. special sprays (free amines)
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dielectric constant
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measures how well solvents separate charges 1. methanol (32.7) 2. acetone (21) 3. ethyl acetate (6.0) 4. hexane (1.9)
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how to choose a mixed solvent for TLC?
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pick ones that distinctly separate one solute from the others. then choose which applies to the unknown. -also fluorenone was yellow so picked it based on that too
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what can TLC show?
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if all the reactants are used up and how much longer to run the reaction -can't give % yield
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why should the filter paper be shorter than the spot plate in the eluent?
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so the solvent only ascends the plate (i.e. doesn't come from both sides)
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one method to prepare alkenes
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dehydrating 2° or 3° alcohols (1° alcohols are much harder)
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alcohol dehydration
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an acid-catalyzed reaction by strong, concentrated acids (e.g. phosphoric or sulfuric acid). the acid protonates the alcohol to form an alkene. -alcohol is the limiting reagent since the acid is a catalyst
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how to isolate a high laboratory yield of alkenes?
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distilling the product of alcohol dehydration, which shifts the equilibrium to the right
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what reactions can determine the presence of an alkene?
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alkenes react with: 1. bromine solution (red) to decolorize it 2. potassium permanganate (purple) to produce a managense oxide (brown)
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Zaitzev's Rule
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the more highly substituted alkene is formed in a reaction
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what is the main limitation of alcohol dehydration?
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the carbocation intermediates can rearrange which results in a complex mixture of many isomers. -utility limited to degenerate rearrangements (the most stable products without rearrangements)
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gas chromatography's role in alcohol dehydration
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determines the percent of each product formed (first peak is an air peak)
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gas chromatography (GC)
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analyzes mixtures of organic compounds. the apparatus is called a gas chromatograph. as the sample passes through the column, it separates into its components and a computer measures the presence of each. -stationary phase: organic dehydration solution -mobile phase: He gas -TCD allows for theoretical recovery and FID destroys the sample
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why did we use a GC column of 5% phenyl substitution of methyl?
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because it lowers the b.p. to make the mobile phase travel faster, which means there is less retention time and more accurate results.
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TCD vs. FID in GC
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TCD analyzes in terms of conductivity difference between the carrier gas and He, while FID destroys the sample during analysis
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steam distillation
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(discovered around 1000 AD) the codistillation of plant essential oils with water. doesn't follows Raoult's Law because between immiscible liquids in a heterogeneous mixture). b.p. will always be below the b.p. of water. two methods: -direct steam method -live steam method
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what does the composition of the vapor pressure in steam distillation depend on?
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the vapor pressure of each components because all gases mix even if the liquid is immiscible. the mole fraction is not needed because the components are not soluble -P(tot)=P(a) + P(b)
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why are the varying b.p. of water and limonene significant during steam distillation?
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because limonene will have a lower vapor pressure at 100°C
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direct steam distillation method
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generates steam by heating a distillation flask containing the compound and water (method we used)
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why do heterogenous mixtures boil at lower temperatures than predicted by Raoult's Law?
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because they behave like azeotropes (constant boiling mixtures that cannot be altered by simple or fractional distillation). this incompatibility leads to a higher than expected vapor pressure.
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live steam distillation method
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generates steam outside and passes it through the distillation flask using an inlet tube
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TLC solutes relative polarities
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in order of increasing: 1. benzoic acid 2. 9-flourenone 3. trans-stilbene
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TLC solvents relative polarities
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in order of increasing polarity: 1. acetone 2. ethyl acetate 3. methanol 4. hexane
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binary system phase diagram
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below of curve is solid and above is liquid. both solid and liquid present inside the curve
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fractional distillation hold-up
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the liquid that cannot be distilled because it condensed on the surface of the column
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when and why do you use a saturated NaCl (brine) solution?
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used when there's an emulsion to decrease the solubility of the organic layer in the aqueous layer, which destroys the emulsion (i.e. separates). -increases the surface tension of the droplets -increases the density of the aqueous layer (diethyl ether solvents)
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common drying agents
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CaCl₂ (no go for hydroxyl, amino and carbonyl), Na₂SO₄ (wet solutions), CaSO₄ (no go for wet solutions), and MgSO₄ (works well with diethyl ether)
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drying agents
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dry isolated organic compounds because usually they are contaminated with traces of water. in aqueous extractions, the water is partially miscible with the organic layer.
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emulsion
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stable dispersion of one liquid in a second immiscible liquid (b, which delays the separation (problem) of the two liquids. -caused by shaking (e.g. vinaigrette)
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crystallization vs. precipitation
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crystallization: -crystals are produced -takes more time and is harder due to ordered crystal structure precipitation: -amorphous solids are produced
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recrystallization second crop and third crop
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further improves the recovery of material by harvesting another round using the mother liquor (won't be as pure as the original crop because the mother liquor's impurities is alway increasing)
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recrystallization solubility gradient
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the change in solubility with the change in temperature -water and alcohols show the greatest gradients
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why is fluted filter paper used in gravity filtration?
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to increase the surface area of the paper to make the filtration more efficient
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why are many small extractions better than one large one?
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because you are increasing the surface area between the organic and aqueous layer to separate them more thoroughly
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three factors affecting crystallization
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1. concentration of the solute 2. what solvent is used 3. temperature of the solvent
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gas chromatograph
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has a flow controller after the He gas chamber. then the sample is injected into the column and a computer detects the separation of substances. wastes exits
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polarimeter
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measures the extent to which a substance interacts with polarized light. optically active substances rotate the plane of polarization to some angle α.
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plane polarized light
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light that passes through a prism
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specific rotation
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[α] = α / c⋅l -c: g/mL -l: dm (1 dm=10cm)
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polarimetry
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analyzes the purity of the substance produced (e.g. limonene)
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