Micro Exam 3 – Flashcards
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the genome in bacteria is a? |
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single, closed loop of double stranded DNA |
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the genome is held together by? |
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hydrogen bonds |
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hydrogen bonds holding the genomes occur in only what pairs? |
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AT -or- CG |
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a gene is a? |
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segment of DNA, (a sequence of nucleotides) |
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genes code for? |
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a functional product, usually a protein |
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when a gene is expressed |
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DNA is transcribed to prduce RNA mRNA is then translated into proteins |
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the DNA in a cell does _____ before division? |
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duplicates, so that each daughter cell receives the same genetic material |
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during replication the two strands of DNA separate at the ______ |
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replication fork |
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during replication each strand is used as a template by DNA polymerase to synthesize? |
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two new strands of DNA (rule of nitrogenous base pairing) |
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DNA can only be replicated in what direction? |
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the 5-->3 direction this means one strand is coded continuously and the other is coded discontinuously |
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another name for the replication process |
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semiconservative |
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semiconcervative |
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names so because each new double-stranded DNA molecule contains one original and one new complementary strand |
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in replication each daughter bacterium receives? |
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a chromosome that is virtually identical to the parents |
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during transcription, the enzyme RNA polymerase? |
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synthesizes a strand of R?NA from one strand of the double stranded DNA that serves as a template |
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RNA is synthesize in what direction |
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5-->3 same as DNA |
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the process in which the information in the nucleotide base sequence of mRNA is used to dictate the amino acid sequence of a protein |
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translation |
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the mRNA associates with |
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ribosomes, which consist of rRNA and protein |
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three-base segments of mRNA that specify amino acids are called? |
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codons |
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why is the genetic code in translation degenerate |
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most amino acids are coded for by more that one codon(three-base segment of mRNA) |
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how many sense codons how many non-sense codons(stop codons) |
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61 3 |
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specific amino acids are attached to? |
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molecules of tRNA |
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the anti-codon is located on what |
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tRNA |
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the base pairing of codon and anticodon at the ribosome results in what? |
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specific amino acids being brought to the site of protein synthesis |
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the ribosome moves along the mRNA strand as amino acids are joined to form ____? |
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a growing polypeptide |
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in prokaryotes, translation can begin before___? |
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transcription is complete |
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in the regulation of bacterial gene expression, the regulation of protein synthesis at the gene level is energy efficient because |
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proteins are synthesized only as needed |
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in the regulation of bacterial gene expression constitutive enzymes are produced? |
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continually by the cell, |
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a series of enzymes which are produced at the same time because they are all used fro the same pathway |
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operon |
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this controls the synthesis of one or several repressible enzymes in the regulation of bacterial gene expression |
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repression |
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when cells are exposed to a particular end-product during repression this happens? |
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synthesis of enzymes related to that product decreases. |
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the process by which certain chemicals (inducers) trigger the cell to synthesize more enyzmes |
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induction |
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example of induction |
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lactose is an inducer of B-galactosidase in E. coli which enables the bacteria to metabolize lactose |
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permanent changes in genome is known as what? |
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mutation |
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mutations may be? |
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spontaneous or induced |
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type of mutation that comes from a single base change and may be missense, nonsense,or silent mutations |
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point mutations |
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transfer of DNA between bacteria can occur by what processes |
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conjugation, transformation, and transduction |
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the use of microorganisms, celss, or cell components to make a product such as foods, antibiotics, vitamins, or enzymes. |
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biotechnology |
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DNA that has bwen artificially manipulated to combine genes from two different sources |
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recombinant DNA |
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the insertion or modification of genes to produce desired proteins |
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recombinant DNA technology |
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in recombinant DNA technology a desired gene is inserted into a? |
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DNA vector, such as a plasmid or a viral genome. |
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the vector inserts what? |
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DNA into a new cell, which is grown to form a clone. |
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in recombinant DNA technology large quantities of the gene product can? |
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be harvested from the clone |
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tools of biotechnology: selection |
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microbes with desirable traits are selected for culturing by artificial selection |
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tools of biotechnology: mutation |
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mutagens are used to cause mutations that might result in a microbe with desirable traits. |
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tools of biotechnology: site directed mutagenesis |
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used to change a specific codon in a gene |
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tools of biotechnology: restriction enzymes |
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restriction enzymes recognize and cut only one particular nucleotide sequence in DNA |
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some restriction enzymes produce? |
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sticky ends, (short stretches of single0stranded DNA at the ends of the DNA fragments.) |
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fragments of DNA produced by the restriction enzyme will? |
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spontaneously join by base pairing, and DNA ligase can covalently link the DNA backbones. |
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plasmids that can exist in several different species |
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shuttle vectors |
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a plasmid containing a new gene can be inserted into a cell using a shuttle vector by what process? |
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transformation |
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a virus containing a new gene can insert the gene into a cell using what? |
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shuttle vector |
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used to make multiple copies of a desired pieces of DNA enzymatically |
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polymeraze chain reaction |
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made by cutting up an entire genome with restriction enzymes and inserting the fragments into bacterial plasmids of phages |
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gene libraries |
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what kind of DNA can by cloned in gene libraries |
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complementary DNA (cDNA) made from mRNA by reverse transcriptase |
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uses to make in vitro synthetic DNA |
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synthesis machine |
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used to introduce a new gene into a cloning host |
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vectors |
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e coli or accharomyces cerevisiae are often used to produce proteins by recombinant DNA why? |
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because they easily grow and their genomics are well known. the cells are usually lysed to recover the protein. |
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cloned DNA is used to? |
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produce products, study the cloned DNA, and alter the phenotype of an organism |
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therapeutic applications of recombinant DNA technology |
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insulin, subunit vaccines, DNA vaccines, gene therapy, and the human genome project |
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destruction of all microbial life |
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sterilization |
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destruction or removal of vegetative pathogens from inert surfaces |
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disinfection |
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destruction or inhibition of vegetative pathogens on living tissue |
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antisepsis |
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a chemical that destroys bacteria |
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bacteriocide |
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agents that inhibit or prevent the growth of bacteria |
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bacteriostatic |
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removal of microorganisms to "safe level of standards" |
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decontamination |
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actions of mecrobial control agents |
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affecting cell wall synthesis alternation of membrane permeability damage to proteins damage to nucleic acids |
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dry heat |
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dry heat sterilization kills by oxidation |
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example of dry heat |
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incenteration, dry ovens use hot air sterilization |
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moist heat |
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denatures proteins and DNA whil destroying membranes |
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example of moist heat |
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autoclave, steam under pressure. for steam sterilization to work the steam must contact items surface |
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example of moist heat |
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pasturization, reduces spoilage organisms and pathogens, but does not sterilize. |
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low temperature |
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inhibits microbial growth |
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filtration |
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removes microbes from liquids and gases |
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radiation |
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damages DNA |
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ionizing radiation (X-rays, gamma rays, electron beams) produces? |
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highly reactive hydroxyl radical which damage DNA |
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NONIONIZING RADIATION (uv) does what? |
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produces thymine dimes in DNA |
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chemical methods of microbial control |
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phenolics alcohols oxidizers heavy metals surfactants alkylators |
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the first antiseptic used in surgery |
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phenol |
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disrupts plasma membranes, and precipitates proteins |
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lysol |
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surfactant and protein denaturant |
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chlorhexidine |
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dissolve membrane lipids and coagulate proteins |
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alcohols ethyl and isopropyl |
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hydrogen peroxide,iodine, and chlorine |
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strong oxidizers |
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Ag, Hg, an Cu oligodynamic action, denatures proteins |
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heavy metals |
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quaternary ammonium compounds that disrupt plasma membranes |
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surfactants |
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glutaraldehyde, formaldehyd, and ethylene oxide alkylate proteins and DNA |
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alkylators |
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a gas sterilizer that requires a long exposure time to be effective |
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ethylene oxide (alkylator) |
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the use of drugs to treat a disease |
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chemotherapy |
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drugs that interfere with the growth of microbes within a host |
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antimicrobial drugs |
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a substance produced by a microbe that, in small amounts, inhibits another microbe. |
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antibiotics |
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a drug that kills harmful microbes without damaging the host |
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selective toxicity |
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kills microorganisms directly |
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bacteriocidal |
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prevents microorganisms from growing |
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bacteriostatic |
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this dude descovered penicillin in 1928 by using penicillium |
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fleming |
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these dudes performed the first clinical trials of penicillin in 1940 |
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howard florey and ernst chain |
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inhibitors of cell wall synthesis: peptidoglycan biosynthesis |
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phosphomycin, d-cycloserine |
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inhibitors of cell wall synthesis: lipid carrier inhibitors |
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vancomycin, bacitracin |
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inhibitors of cell wall synthesis: B-lactams(penicllins and cephalosporins) |
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prevent cross-linking of peptidoglycan in actively growing cells, but have little toxicity for human cells which do not make peptidoglycan |
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penicilin and related antibiotics are susceptible to? |
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penicillinases |
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injury to the plasma membrane: |
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polymyxin B injures the plasma membranes of bacteria, but can only be used topically due to toxicity |
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inhibitors of nucleic acid synthesis: quinolones and fluoroquinolones(ciprofloxacin) |
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this inhibits replication of DNA by inhibiting the enzyme DNA gyrase |
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inhibitors of nucleic acid synthesis: rifamycins(rifampin) |
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inhibits the synthesis of mRNA |
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inhibitors of protein synthesis: oxazolidones(linezolid) |
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this binds to the 50s subunit of ribosome and prevent initiation of protein synthesis |
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inhibitors of protein synthesis: aminoglycosides(streptomycin, neomycin) |
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inhibits protein synthesis by binding to the 30s portion of the ribosome, changing its shape, and causing the mRNA to be read incorrectly. |
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inhibitors of protein syntheis: tetracyclines |
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inhibit protein synthesis by interfering with attachment of tRNA to the mRNA ribosome complex |
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inhibitors of protein synthesis: chloramphenicol |
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inhibits protein synthesis by binding to the 50s portion of the ribosome and inhibits formation of the peptide bond |
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inhibitors of protein synthesis: macrolides(erythromycin) |
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inhibits protein synthesis by binding to the 50s portion of the ribosome and preventing translocation |
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the movement of the ribosome along the mRNA |
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translocation |
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competitive inhibitors of the synthesis of essential metabolites: sulfonamides and trimethoprim |
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these competitively inhibit the conversion of para-aminobenzoic acid, a precursor of folic acid which is critical in the synthesis of DNA,RNA, and protein. |
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when to things work together to make a result greater than either one could make alone 1+1=3 |
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synergism |
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inhibitors of cell wall synthesis: |
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peptidoglycan biosynthesis lipid carrier inhibitors b-lactams |
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inhibitors of nucleic acid: |
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quinolones rifamycins |
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inhibitors of protein synthesis: |
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oxazolidones aminoglycosides tetracyclines chloramphenicol macrolides |
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competitive inhibitors of synthesis of essential metabolites: |
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sulfonamides trimethoprim |