Final Exam Flashcards

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Rhinitis
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URT
-Cold.
-Viral: Rhinovirus & coronavirus
-cilliated epithelial cells of nose
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Pharyngitis & Tonsilitis
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URT
-Sore throat and tonsilitis
-Infected mucosa and lymphoid tissue
-Cytomegalovirus(CMV) blood to placenta
-EBV.
-S. pyogenes/N. gonorrhoeae/C. diptheria
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Otitis media and sinusitis
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URT
-Ear & sinus
-50% viral & 50% bacteria
-Respiratory syncytial virus (RSV)/Influenza/parainfluenza/rhinovirus/adenovirus
-S. pneumoniae/Haemophilus influenzae/Moraxella
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Epiglottitis
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URT
-H. influenzae type B(vaccine Hib)
-Ages 2-7
-Symptoms: Drooling/dysphagia/respiratory distress
-Life threatening if severe inflammation
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Laryngitis & tracheitis
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LRT
-Virus:Parainfluenza(croup=barking seal)
RSV, Influenza, Adenovirus
-Bacteria: GAS, H. influenzae, S. Aureus
-C. diptheria(life threatening but vaccine-DaPT)
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Whooping Cough/Pertussis
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LRT
-Bordetella pertusis
-Attach to ciliated mucosa in trachea (fimbriae & hemagglutinin-prevents cilliary movement)
-Toxic factors:
1.Pertussis toxin-Prod mucoid secretions
2.Adenylate cyclase toxin-Inhibits chemotaxis,phagocytosis, & killing
3.Tracheal Cytotoxin-Kills tracheal epitherlia cells
4.Endotoxin
90-95% rate of infection if exposed to unvaccinated
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Acute Bronchitis
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LRT
-Inflammation of the tracheal/bronchial tree
-P. pathogens: Rhino corona, adeno, influenze viruses & Mycoplasma pneumoniae
-Secondary invaders-S. pneumoniae, H. influenzae
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Influenza
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LRT-The flu
-Influenza virus types A, B, C,; A segmented RNA, 3 HA types, 2NA types
-Antigenic epitopes change from yr-yr(drift and shift)
-Airborne droplets
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Influenza Colonization
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-Attaches via HA to sialic acid receptors on ciliated epithelium of trachea/bronchi
-RME
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Pathology of Influenza
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-Incubation 1-3 days
-Impair mucociliary clearance, tacheobronchitis, bronchospasms;cytokines released from damaged cells & WBC
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Presentation of Influenza
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-Fever of 102-104
-Chills
-Severe headache w/retro-orbital pain
-Muscular aches
-Dry cough
-Weakness

Resolves in 1-2 weeks
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Complications of Influenza
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Primary influenza-1% of cases but 30% fatal. Pregnant women at increased risk

Secondary Bacterial pneumonia-H. influenzae, S. pneumonia, S. aureus, S. pyogenes
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How many cases are required for influenza to be considered epidemic?
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10,000-50,000 DEATHS
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Bronchiolitis
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LRT
-Children <2
-Necrosis of epithelial cells lining bronchioles

-75% RSV (Respiratory Syncytial Virus)
Colonization:Nasopharynx-surface spikes are fusion proteins that fuse host cells to cause syncytia. Virus invades LRT by surface spread in secretions.
-Maternal Ab in infants react w/virus
-Presentaion:bluish ashy lips/cough/rapid respiration

-25% Other viruses
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RSV
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Respiratory Syncytial Virus
Paramyxovirus(RNA), enveloped
Humans only reservoir
Transmission:Resp. droplets to hands
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Pneumonia
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LRT
-Pathogen clinically indistinguishable
Transmission: Inhalation of rep. droplets or aspration from UR
Colonization: Attach to rep. epithelium
Pathology: Respdistress from the interference of gas exchange in lungs,
Children: Viral maybe bacterial
Adults: Bacterial
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Bacterial Pneumonia
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Acute onset, high fever
Typicals: S. pneumoniae, H. influenzae, S. aureus, Klebsiella, E. coli, Pseudomonas
Atypical: M. pneumoniae, Chlamydia pneumoniae, Legionella pneumophila, Coxiella burnetii
-Chest Exam for: Rales(abnormal crackles)/Evidence of consolidation/Chest X-ray
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Viral Pneumonia
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Transmission: Inhaled or from blood
Colonization: Attach specifically
Orgs: RSV-Chlidren
Parainfluenza virus-Children; hemagglutinin & neuraminidase & fusion proteins
Adenovirus
Influenzavirus
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Fungal Infections of LRT
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Chronic
-Aspergaillus fumigatus: predisposing condition or immunosuppressed individuals. 45 degree branching septate hyphae present

-Histoplasma Capsulatum-Histoplasmosis

-Coccidiodes immitis-San Joaquin Valley Fever

-Blastomyces dermititidis-blastomycosis

-Pneumocystis jiroveci-pneumocystis pneumonia
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Cystic Fibrosis
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Very Viscous bronchiol secretions leads to fluid stasis in the lungs & infections w/P. aeruginosa (S. auresus, H influenzae, B. cepacia

CF patients over reactive inflammatory response= too many PMNs, too much secretion=damage to mucosal epithelium, fluid stasis=bacteria are not removed
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NK cells
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viruses & I.C. bacteria
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Interferon
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Viruses
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Phagocytosis
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PMN, E.C. bacteria
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Complement Activation
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E.C. bacteria
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Steps for Infectous Microbes
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1. Entry
2. Spread
3. Multiplication
4. Evasion
5. Transmission
6. Pathology
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Gram Positive vs. Gram Negative Cell Wall
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GP: LTA
Thick peptidoglycan
resists activity of bile
Digested by lysozyme which targets beta 1-4 glycosidic linkages

GN: Thin peptidoglycan
LPS-Carbs: Stimulates immune response
Lipid A: Endotoxin that induces fever, ^vascular permeability
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Importance of Capsule
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-Attach to a wide variety of surfaces
-More resistant to engulfment by host defense cells
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Importance of Flagella
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-Movement
-Proteins are stongly antigenic/immune simulating
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Importance of Fimbriae
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-aka common pili
-Attachment(adhesins target cell membranes)
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Importance of Pili
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-Exchange genetic info, including antibiotic resistance
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Entry of bacteria into host
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-Direct contact
-Ingestion
-Fomites(inanimate objects)
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Clinical significance of normal microbiota
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-Common contaminants of clinical specimens
-Opportunistic pathogens
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Opsonin
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Molecule that attaches to cells; providing a bridge to receptors on phagocytic cells and enhances the rate of phagocytosis
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Edema
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Excess accumulation of serous fluid in connective tissue or in a serous cavity
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Erythema
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Abnormal redness of the skin due to capillary congestion (as in inflammation)
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Inflammation
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locall response to cellular injury
Marked by: Capillary dilation, leukocytic infiltration, redness, heat, pain, swelling, & often loss of function
-Serves as a mechanism initiating the elimination of noxious agents and damaged tissue
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Non-specific Physical Defenses
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-Overlapping epithelial cells
-Turbulence in nose that makes it hard for MOs to attach
-Shedding, scrapping, flushin(saliva, urine, tears)-Shear force
-Muco-ciliary clearance-goblet & ciliary cells
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Non-Specific Chemical Defenses
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1. Acids
2. Enzymes(lysozymes)
3.Microbiciidal chemicals (zinc & dermicidin)
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Non-Specific Biological Defenses
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1. Normal microbiota-Physical, competition, inhibitory substances
2. Immune defense cells and molecules
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2nd line NS Defense
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Inflammation
-phagocytic cells
-cytolytic cells
-acute phase proteins: CRP, interferon, and complement
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Signs of acute inflammation
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1. Erythema-redness
2. Edema-swelling
3. Heat
4. Pain (sensitivity to area)
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Triggers of accute inflammation
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1. IM
2. Peptidoglycan, LTA, LPS
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Roles of phagocytes
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-Engulf & destroy foreign matter
-Secrete chemicals (cytokines)
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Types of phagocytic cells
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-PMN=neutrophils
-mononuclear leukocytes
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PMN
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-Dominant in beginning of inflammatory response
-Contains cytoplasmic granules loaded with antimicrobial chemicals
-Best with extracellular pathogens
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Mononuclear Leukocyte
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-Later in inflammatory response
-Concentrated in lung, liver, lymph nodes and spleen
-live longer than PMNs
-APC
-Best with intracelular pathogens
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Which type of phagocyte is best against extracellular pathogens?
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PMNs
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Microbe-PAMP to PRR-Phagocyte
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Allows microbe and phagocyte to overcome negative-negative charge repulsion since both have exterior negative charges.
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NK cells
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-Target viruses
-attach to infected to cells via glycoproteins
-release perforins & granzyme to kill cell
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Th1, Th2, Tregs
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CD4
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Tc
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Cytotoxic T cells
CD8
Kills cells infected w/intracellular pathogens
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Which MHC class do Th cells recognize?
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MHC class 2
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What MHC do Tc recognize?
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MHC class 1
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Activation of T lymphocytes
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1. Receive cytokines from APC(IL-1)
2. ^ of IL-2 Received adn secrete/receive Il-2=proliferation
3. Differentiation into: effector Th1 cells(activate macrophages=NK & Tc) & Th2 (activates B cells to make antibodies)
Memor Tcells
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IL-2
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-Secreted by Th1
-Stimulates Tc proliferation & maturation
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IL-4
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-Secreted by Th2
-Stimulates B cell proliferation & differentiation into plasma cells
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gamma-interferon
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-Secreted by Th1 cells
-Activates effector Tc, macrophages and NK to kill intracellular pathogens
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Opsonizing agents
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C3b
CRP
IgG
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What is a neutralizing antibody?
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IgA
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Rheumatic Heart Disease
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Delayed sequela of URT infection with group A beta-hemolytic strep
Abs that target strep bind to heart tissue due to similarity in receptors. IS cross reacts w/heart and kidneys
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Antigenic Drift
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Caused by single base mutations in RNA. Slight changes in hemagglutinin (H) of influenza virus
Seasonal Epidemics
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Antigenic Shift
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Major changes in surface proteins caused by recomvinationg of genes b/w 2 different strains of virus.
Pandemic
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What MO produce IgA protease?
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Nice STriP of Ham
Neisseria
Streptococcus pneumoniae
Haemophilus influenzae
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Which cytokines are responsible for fever?
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IL-1 & TNF
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Physiological cause of fever
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Hypothalamus secretes PG upon binding of IL-1 or TNF. PG then self activates the hypothalamus
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Type 1 Hypersensitivity
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IgE
rapid onset
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Type 2 Hypersensitivity
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IgG
activated mins to hrs
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Type 3 Hypersensitivity
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Response to Ag-Ab complex
IgM & IgG stick to blood vessels or tissue activating C & neutrophils
Activated 3-8 hrs
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What type of hypersensitivity is the reaction to tuberculosis?
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Type 4
mediated by t-cells & macrophages
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Steps in a clinical encounter
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1. Patient History
2. Physical Examination
3. Investigation plan
4. Management plan
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What is the UUT? LUT?
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Upper Urinary Tract=kiney & ureter
Lower Urinary Tract= Urinary bladder & urethra
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Common community acquired UTI pathogens
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1. E. coli
2. S. Saprophyticus
3. Proteus miravilis
4. Klebsiella, Enterobacter, Serratia, Pseudomonas aeruginosa
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Hospital acquired UTI pathogens
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1. E. coli
2. Klebsiella, enterobacter, serratia, Pseudomonas aeurinosa
3. GPC
4. Proteus mirabilis
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Predisposing factors for UTI
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Anything that
Disrupts of urine flow
Preventscomplete emptying of bladder
Promotes microbial access
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Virulence factors of UTI E. coli
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O & K serotypes
-Pathogenicity island
-P fimbriae
-Capsular acid polysaccharid to resist phagocytosis
-Membran active cytotoxins
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VF of S. saprophyticus
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Adherence to uroepithelium
Microbistatic to GP & GN
Urease-ultimately increases pH cause stone formation allowing more attachment sites for pathogens
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P. mirabilis
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Flagella
Urease
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Urethritis
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LUT
-Dysuria(painful urination)
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Cystitis
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LUT Bladder
-Rapid onset of dysuria;^urgency/frequency
-Cloudy urine(pus or bacteria);blood
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Prostatitis
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LUT Prostate
-dysuria, ^frequency, low back pain, fever
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Pyelonephritis
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UUT Renal parencyma
-Cystitis+more sever FEVER
-Septicemia, loss of renal function
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How to collect urine samples
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Voiding(midstream)
Urinary catheter
Suprapubic bladder aspiration
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How do you distinguish cystitis from pyelonephritis?
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Pyelonephritis includes sever fever
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What is consider clinically significant bacteriuria?
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10^5 cells
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What MO helps protect the vagina & how?
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Lactobacili because it secretes acid=lower pH=barrier against infection
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Incurable STD's
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HumanPapillomavirus
Herpes Simplex Virus
HIV
Haemophilus ducreyi
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Human Papilloma Virus
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HPV-Genital warts
-Attach via capsid protein, enter via RME
Pathology-Dyplasia(abnormal growth)
-Associated with cervical neoplasia
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Reading HPV PAP
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-Less cytoplasm=more sever dysplasia
-Mildly ^nuclear to cytoplasm ratio
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Chlamydia trachomatis
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Non-gonococcal urethritis
E-Abrasions
A-Receptors on host cell, parasite-induced endoytosis
S-asymptomatic or urethritis
C-infertility also PID, ectopic pregnancy
txt-tetracycline etc
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Candida albicans
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Yeast infection
-Part of normal microbiota
T-disruptions to bacterial vagina community results in overgrowth with yeast
S-UTI, burning/cottage cheesy discharge
Balanitis(inflammation of glans penis)
txt-antifungal
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Trichomonas vaginalis
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Vaginitis-Protozoa
E-Vagina in women; Urethra/Prostate in men
S-Vaginitis, yellow/green frothy discharge. Rise in vaginal pH
txt-metranidazole
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Herpes Simplex Virus types 1 & 2
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Genital Herpes
E-Membrane fusion
P-Causes host cells to fuse together forming giant cells.
S-Genital lesion vesicles->ulcer w/tender, swolen nodes, fever, headache, malaise
-Remains latent in root ganglion
-Can reactivate due to stress, trauma or sun
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Neisseria gonorrhoea
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Gonorrhea
-Women have 20% chance of passing; Men 50-90%
E-Mucous membranes
A-Common pilus, Opa proteins. Invade non-ciliated e cells
P-LPS & Enzymes
-Neonatal blindness
TXT-Treat for gonorrhea (Cefixime & Ciprofloxacin) & Chlamydia
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AIDS/HIV
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Disease of immune cells-CD4(Macrophages & Th)
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Treponema pallidum
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Syphilis
E-abrasions
S- Chancre 2-4 weeks postinfct
Primary-bacteria multiply in nodes causing swelling
Seconary- Bacteria multiply causing lesions. Most cured some become latent
Tertiary-Host cell-mediated response causes progressive destruction of neuro-, cardio-, skin, and joints
Txt-arsenic, penicillin,
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Gastritis
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-Inflammation of the stomach
-Pain in upper abdomen
-Bleeding
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Gastroenteritis
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-Inflammation of stomach & intestines
-Diarrhea, nausea, vomiting, crampy abdominal pain
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Colitis
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Intestinal syndrome that primarily involves the colon or large intestines
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Enterocolitis
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Inflammation of mucosa of both large & small intestine=dysentery-diarrhea often contains blood & mucus
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Hepatitis
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Caused by liver damage
Patients become jaundiced due to bilirubin build up in the body
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How do pathogens cause disease in the GI tract?
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1) Action of toxins
2) Adherence to & effacement of microvilli=>inflammation
3) Invasion of intestinal epithelial cells
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Enterotoxin
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Results in net secretion w/out intestinal damage
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Cytoskeleton-altering toxin
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Alters cell shape, may injure cells but not lethal
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Cytotoxin
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Causes cell damage and ultimately cell death
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Neural toxin
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Alters smooth muscle activity in intestines
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What causes bacterial food poining?
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Ingesting preformed toxins; not infections
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Bacteria responsible for food poisoning
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Clostridium botulinum-botulism.

Staphylococcus aureus-most common. Starts 30 mins-8hrs post ingestion. Resolves in 24 hrs.

Bacillus cereus-Emetic. Starts 1-5hrs after ingestions. Lasts 1-6 hrs
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Pathology of Vibrio cholera
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S-Contaminate water
P-1. Ingest large numbers>10^8
2. Flagella allows Vibrio to reach epithelial cells
3. Attachment by way of fimbriae to receptors on brush border & crypt cells of small intestine
4. Damage due to production of CXT(A & B subunits). Disrupts adenylate cyclase. CXT=enterotoxin, neurotoxin, & cytotoxin
5.Secretion of large quatities of Cloride ion ino intestine. Water and sodium ion follow=hypersecretion of fluids & electrolytes
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Symptoms of Cholera
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Extreme diarrhea, rice water stool
Dehydration & electrolyte imbalance=cardiac failure
Txt-Fluid & electrolyte replacement
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What mechanism do ETEC(Enterotoxigenic E. coli) and B. cereus use to cause disease?
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Both colonize epithelial surfaces of small intestine & then release toxins. Do not enter cells.
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What mechanism does Shigella use to cause disease?
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Atrach to and enter epithelial cells. Multiply intracellularly & destroy(efface) mirovilli of epithelial cells and induce diarrhea
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Pathology of Shigella
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S- Contact w/feces from infected person
P-1. descending infection of intestine. Small intestine then colon.
2. Capsule, secretes enterotoxin=watery diarrhea
3. Adhere to cells of colon using Outer membrane proteins
4. Use M cells of GALT and enterocytes to transport Shigella across intestinal epithelium using endocytosis.
5.Escape from phagolysosome
6. Triggers macs to produce IL-1 also triggers apoptosis
7. IL-1 induce inflammation & stimulates edema & extravasation of neutrophis across epithelial barrier
8. Movement of PMNs destroys barrier allowing shigella to move across in mass
9. Further prod. of cytokines & intense inflammation w/destruction of epithelium=>ulcerations=>blood in stool
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Symptoms of Shigella infection
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Blood and pus filled diarrhea
Self limiting 2-3 days
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What other baacteria share the disease mechanism of Shigella?
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EHEC
Yersinia enterocolitis
Entamoeba histolytic
Rotavirus/Norwalk virus
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Salmonella enteritidis, S. typhmuium
Salmonella typhi, paratyphi
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Salmonellosis
Typhoid fever
Pathology:
1. Ingest lots of cells
2. Attach to fibronectin of epithelial cells of small intestine
3. Transported by M cells to GALT
4. Invade gut wall=ulcers adn hemorrhage. Spread to intestinal lymphatics & are phagocytized by macs
5. Produces toxin that ^cAMP & fluid secretion=loose, watery diarrhea & nausea
6. Causes influx of PMN that confines infection to GI
7. OR influx of macrophages which resuls in systemic spread.
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What mechanism do S. enteritidis & S. typhi use to cause disease in the GI?
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Attaches, enters & multiplies in deep tissues that are normally sterile-submucosal or subepithelial tissues sometimes will spread systemically
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What mechanism do Hepatitis A virus, Reoviruses & Enteroviruses use to cause disease in the GI?
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Attaches, enters & multiplies in deep tissues that are normally sterile-submucosal or subepithelial tissues sometimes will spread systemically
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Character of Meningitis
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High fever, headache, stiff neck
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How do MO get to the CNS?
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1. From the bloodstream-cross the BBB (Bacterial meningitis)
2. From peripheral nerves (Herpes, VZV, rabies)
3. Invasion from bone/sinuses/middle ear
4. Trauma
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Encephalitis
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Acute febrile illness
Changes in mental state
consciousness
behavior
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Bacterial Meningitis
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Acute-nearly always fatal

Neonates: E.coli, Group B strep
1mo to 5 yrs: Haemophilus influenzae type B
5 to 40 yrs: Neisseria meningitidis
30 and over:S. pneumoniae
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Viral meningitis
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Self-limiting/non-fatal
1. Enteroviruses
2. Arboviruses
3. HIV
4. HSV-2
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CSF of bacterial meningitis vs viral
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Bacterial-elevated:neutrophils, protein. Decreased: glucose

Virus
Elevated:lymphocytes, protein.
Normal glucose
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Viral encephalitis
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Very severe
1. Arboviruses
2. HSV-1
3. Eneroviruses, mumps
4. Rabies(Rhabodovirus)
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Protozoan encephalitis
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Amebic encephalitis-Naegleria fowleri
African Sleeping Sickness-Trypanosoma
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Abscess
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Localized collection of pus
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Why are MOs in abscesses difficult to treat with antimicrobial agents?
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1. Microbes aren't multiplying
2. Chemical nature of pus interferes with action of some antibiotics
3. Hard to reach site due to lack of vessel penetrations
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Scalded skin syndrome
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Strains of S. aureus with lysogenic phages
Causes splitting in deep layers=40% of outer skin layers are lost=loss of body fluid, high fever, and bacteremia
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Nectrotizing fasciitis/Flesh eating Strep
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GAS infected by phage
Subdermal tissues
2 toxins-Pyrogenic toxin A: superantigen-IL2
Exotoxin B-destroys tissues by breaking down protein 1in/hr
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Exanthems
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Viral diseases resulting in skin rashes
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Measles
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Rubeola virus
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Scarlet Fever
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s. PYOGENES
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German measles
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Rubella virus
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Disease 5/Erythema infectiosum
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Parovirus B19
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Diseae 6/Roseola infantum
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Human Herpesvirus 6
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Most dangerous pathogen of burn damaged skin
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P. aeruginosa
GNR/Ox+
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Sites of action of antimicrobials
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1. Cell wall synthesis
2. Cell membrane function
3. Nucleic acid synthesis or replication
4. Bacterial ribosome and protein synthesis
5. Metabolic pathways
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Ciprofloxacin
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Quinolline
DNA replication
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Sulfamethoxazole
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Sulfonamide
Antimetabolites
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Tetracycline
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Tetracyline
Protein synthesis
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Gentamicin
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Aminoglycoside
Protein synthesis
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Cephalothin
answer
Beta Lactam
cell wall synthesis
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