Final Exam Flashcards
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            | Rhinitis | 
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        | URT -Cold. -Viral: Rhinovirus & coronavirus -cilliated epithelial cells of nose  | 
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            | Pharyngitis & Tonsilitis | 
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        | URT -Sore throat and tonsilitis -Infected mucosa and lymphoid tissue -Cytomegalovirus(CMV) blood to placenta -EBV. -S. pyogenes/N. gonorrhoeae/C. diptheria  | 
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            | Otitis media and sinusitis | 
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        | URT -Ear & sinus -50% viral & 50% bacteria -Respiratory syncytial virus (RSV)/Influenza/parainfluenza/rhinovirus/adenovirus -S. pneumoniae/Haemophilus influenzae/Moraxella  | 
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            | Epiglottitis | 
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        | URT -H. influenzae type B(vaccine Hib) -Ages 2-7 -Symptoms: Drooling/dysphagia/respiratory distress -Life threatening if severe inflammation  | 
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            | Laryngitis & tracheitis | 
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        | LRT -Virus:Parainfluenza(croup=barking seal) RSV, Influenza, Adenovirus -Bacteria: GAS, H. influenzae, S. Aureus -C. diptheria(life threatening but vaccine-DaPT)  | 
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            | Whooping Cough/Pertussis | 
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        | LRT -Bordetella pertusis -Attach to ciliated mucosa in trachea (fimbriae & hemagglutinin-prevents cilliary movement) -Toxic factors: 1.Pertussis toxin-Prod mucoid secretions 2.Adenylate cyclase toxin-Inhibits chemotaxis,phagocytosis, & killing 3.Tracheal Cytotoxin-Kills tracheal epitherlia cells 4.Endotoxin 90-95% rate of infection if exposed to unvaccinated  | 
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            | Acute Bronchitis | 
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        | LRT -Inflammation of the tracheal/bronchial tree -P. pathogens: Rhino corona, adeno, influenze viruses & Mycoplasma pneumoniae -Secondary invaders-S. pneumoniae, H. influenzae  | 
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            | Influenza | 
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        | LRT-The flu -Influenza virus types A, B, C,; A segmented RNA, 3 HA types, 2NA types -Antigenic epitopes change from yr-yr(drift and shift) -Airborne droplets  | 
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            | Influenza Colonization | 
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        | -Attaches via HA to sialic acid receptors on ciliated epithelium of trachea/bronchi -RME  | 
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            | Pathology of Influenza | 
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        | -Incubation 1-3 days -Impair mucociliary clearance, tacheobronchitis, bronchospasms;cytokines released from damaged cells & WBC  | 
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            | Presentation of Influenza | 
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        | -Fever of 102-104 -Chills -Severe headache w/retro-orbital pain -Muscular aches -Dry cough -Weakness Resolves in 1-2 weeks  | 
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            | Complications of Influenza | 
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        | Primary influenza-1% of cases but 30% fatal. Pregnant women at increased risk Secondary Bacterial pneumonia-H. influenzae, S. pneumonia, S. aureus, S. pyogenes  | 
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            | How many cases are required for influenza to be considered epidemic? | 
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        | 10,000-50,000 DEATHS | 
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            | Bronchiolitis | 
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        | LRT -Children <2 -Necrosis of epithelial cells lining bronchioles -75% RSV (Respiratory Syncytial Virus) Colonization:Nasopharynx-surface spikes are fusion proteins that fuse host cells to cause syncytia. Virus invades LRT by surface spread in secretions. -Maternal Ab in infants react w/virus -Presentaion:bluish ashy lips/cough/rapid respiration -25% Other viruses  | 
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            | RSV | 
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        | Respiratory Syncytial Virus Paramyxovirus(RNA), enveloped Humans only reservoir Transmission:Resp. droplets to hands  | 
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            | Pneumonia | 
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        | LRT -Pathogen clinically indistinguishable Transmission: Inhalation of rep. droplets or aspration from UR Colonization: Attach to rep. epithelium Pathology: Respdistress from the interference of gas exchange in lungs, Children: Viral maybe bacterial Adults: Bacterial  | 
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            | Bacterial Pneumonia | 
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        | Acute onset, high fever Typicals: S. pneumoniae, H. influenzae, S. aureus, Klebsiella, E. coli, Pseudomonas Atypical: M. pneumoniae, Chlamydia pneumoniae, Legionella pneumophila, Coxiella burnetii -Chest Exam for: Rales(abnormal crackles)/Evidence of consolidation/Chest X-ray  | 
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            | Viral Pneumonia | 
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        | Transmission: Inhaled or from blood Colonization: Attach specifically Orgs: RSV-Chlidren Parainfluenza virus-Children; hemagglutinin & neuraminidase & fusion proteins Adenovirus Influenzavirus  | 
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            | Fungal Infections of LRT | 
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        | Chronic -Aspergaillus fumigatus: predisposing condition or immunosuppressed individuals. 45 degree branching septate hyphae present -Histoplasma Capsulatum-Histoplasmosis -Coccidiodes immitis-San Joaquin Valley Fever -Blastomyces dermititidis-blastomycosis -Pneumocystis jiroveci-pneumocystis pneumonia  | 
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            | Cystic Fibrosis | 
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        | Very Viscous bronchiol secretions leads to fluid stasis in the lungs & infections w/P. aeruginosa (S. auresus, H influenzae, B. cepacia CF patients over reactive inflammatory response= too many PMNs, too much secretion=damage to mucosal epithelium, fluid stasis=bacteria are not removed  | 
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            | NK cells | 
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        | viruses & I.C. bacteria | 
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            | Interferon | 
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        | Viruses | 
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            | Phagocytosis | 
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        | PMN, E.C. bacteria | 
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            | Complement Activation | 
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        | E.C. bacteria | 
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            | Steps for Infectous Microbes | 
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        | 1. Entry 2. Spread 3. Multiplication 4. Evasion 5. Transmission 6. Pathology  | 
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            | Gram Positive vs. Gram Negative Cell Wall | 
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        | GP: LTA Thick peptidoglycan resists activity of bile Digested by lysozyme which targets beta 1-4 glycosidic linkages GN: Thin peptidoglycan LPS-Carbs: Stimulates immune response Lipid A: Endotoxin that induces fever, ^vascular permeability  | 
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            | Importance of Capsule | 
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        | -Attach to a wide variety of surfaces -More resistant to engulfment by host defense cells  | 
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            | Importance of Flagella | 
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        | -Movement -Proteins are stongly antigenic/immune simulating  | 
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            | Importance of Fimbriae | 
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        | -aka common pili -Attachment(adhesins target cell membranes)  | 
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            | Importance of Pili | 
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        | -Exchange genetic info, including antibiotic resistance | 
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            | Entry of bacteria into host | 
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        | -Direct contact -Ingestion -Fomites(inanimate objects)  | 
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            | Clinical significance of normal microbiota | 
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        | -Common contaminants of clinical specimens -Opportunistic pathogens  | 
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            | Opsonin | 
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        | Molecule that attaches to cells; providing a bridge to receptors on phagocytic cells and enhances the rate of phagocytosis | 
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            | Edema | 
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        | Excess accumulation of serous fluid in connective tissue or in a serous cavity | 
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            | Erythema | 
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        | Abnormal redness of the skin due to capillary congestion (as in inflammation) | 
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            | Inflammation | 
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        | locall response to cellular injury Marked by: Capillary dilation, leukocytic infiltration, redness, heat, pain, swelling, & often loss of function -Serves as a mechanism initiating the elimination of noxious agents and damaged tissue  | 
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            | Non-specific Physical Defenses | 
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        | -Overlapping epithelial cells -Turbulence in nose that makes it hard for MOs to attach -Shedding, scrapping, flushin(saliva, urine, tears)-Shear force -Muco-ciliary clearance-goblet & ciliary cells  | 
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            | Non-Specific Chemical Defenses | 
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        | 1. Acids 2. Enzymes(lysozymes) 3.Microbiciidal chemicals (zinc & dermicidin)  | 
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            | Non-Specific Biological Defenses | 
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        | 1. Normal microbiota-Physical, competition, inhibitory substances 2. Immune defense cells and molecules  | 
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            | 2nd line NS Defense | 
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        | Inflammation -phagocytic cells -cytolytic cells -acute phase proteins: CRP, interferon, and complement  | 
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            | Signs of acute inflammation | 
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        | 1. Erythema-redness 2. Edema-swelling 3. Heat 4. Pain (sensitivity to area)  | 
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            | Triggers of accute inflammation | 
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        | 1. IM 2. Peptidoglycan, LTA, LPS  | 
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            | Roles of phagocytes | 
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        | -Engulf & destroy foreign matter -Secrete chemicals (cytokines)  | 
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            | Types of phagocytic cells | 
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        | -PMN=neutrophils -mononuclear leukocytes  | 
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            | PMN | 
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        | -Dominant in beginning of inflammatory response -Contains cytoplasmic granules loaded with antimicrobial chemicals -Best with extracellular pathogens  | 
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            | Mononuclear Leukocyte | 
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        | -Later in inflammatory response -Concentrated in lung, liver, lymph nodes and spleen -live longer than PMNs -APC -Best with intracelular pathogens  | 
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            | Which type of phagocyte is best against extracellular pathogens? | 
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        | PMNs | 
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            | Microbe-PAMP to PRR-Phagocyte | 
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        | Allows microbe and phagocyte to overcome negative-negative charge repulsion since both have exterior negative charges. | 
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            | NK cells | 
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        | -Target viruses -attach to infected to cells via glycoproteins -release perforins & granzyme to kill cell  | 
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            | Th1, Th2, Tregs | 
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        | CD4 | 
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            | Tc | 
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        | Cytotoxic T cells CD8 Kills cells infected w/intracellular pathogens  | 
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            | Which MHC class do Th cells recognize? | 
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        | MHC class 2 | 
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            | What MHC do Tc recognize? | 
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        | MHC class 1 | 
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            | Activation of T lymphocytes | 
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        | 1. Receive cytokines from APC(IL-1) 2. ^ of IL-2 Received adn secrete/receive Il-2=proliferation 3. Differentiation into: effector Th1 cells(activate macrophages=NK & Tc) & Th2 (activates B cells to make antibodies) Memor Tcells  | 
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            | IL-2 | 
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        | -Secreted by Th1 -Stimulates Tc proliferation & maturation  | 
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            | IL-4 | 
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        | -Secreted by Th2 -Stimulates B cell proliferation & differentiation into plasma cells  | 
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            | gamma-interferon | 
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        | -Secreted by Th1 cells  -Activates effector Tc, macrophages and NK to kill intracellular pathogens  | 
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            | Opsonizing agents | 
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        | C3b CRP IgG  | 
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            | What is a neutralizing antibody? | 
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        | IgA | 
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            | Rheumatic Heart Disease | 
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        | Delayed sequela of URT infection with group A beta-hemolytic strep Abs that target strep bind to heart tissue due to similarity in receptors. IS cross reacts w/heart and kidneys  | 
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            | Antigenic Drift | 
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        | Caused by single base mutations in RNA. Slight changes in hemagglutinin (H) of influenza virus Seasonal Epidemics  | 
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            | Antigenic Shift | 
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        | Major changes in surface proteins caused by recomvinationg of genes b/w 2 different strains of virus. Pandemic  | 
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            | What MO produce IgA protease? | 
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        | Nice STriP of Ham Neisseria Streptococcus pneumoniae Haemophilus influenzae  | 
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            | Which cytokines are responsible for fever? | 
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        | IL-1 & TNF | 
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            | Physiological cause of fever | 
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        | Hypothalamus secretes PG upon binding of IL-1 or TNF. PG then self activates the hypothalamus | 
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            | Type 1 Hypersensitivity | 
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        | IgE rapid onset  | 
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            | Type 2 Hypersensitivity | 
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        | IgG  activated mins to hrs  | 
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            | Type 3 Hypersensitivity | 
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        | Response to Ag-Ab complex IgM & IgG stick to blood vessels or tissue activating C & neutrophils Activated 3-8 hrs  | 
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            | What type of hypersensitivity is the reaction to tuberculosis? | 
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        | Type 4 mediated by t-cells & macrophages  | 
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            | Steps in a clinical encounter | 
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        | 1. Patient History 2. Physical Examination 3. Investigation plan 4. Management plan  | 
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            | What is the UUT? LUT? | 
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        | Upper Urinary Tract=kiney & ureter Lower Urinary Tract= Urinary bladder & urethra  | 
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            | Common community acquired UTI pathogens | 
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        | 1. E. coli 2. S. Saprophyticus 3. Proteus miravilis 4. Klebsiella, Enterobacter, Serratia, Pseudomonas aeruginosa  | 
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            | Hospital acquired UTI pathogens | 
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        | 1. E. coli 2. Klebsiella, enterobacter, serratia, Pseudomonas aeurinosa 3. GPC 4. Proteus mirabilis  | 
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            | Predisposing factors for UTI | 
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        | Anything that Disrupts of urine flow Preventscomplete emptying of bladder Promotes microbial access  | 
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            | Virulence factors of UTI E. coli | 
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        | O & K serotypes -Pathogenicity island -P fimbriae -Capsular acid polysaccharid to resist phagocytosis -Membran active cytotoxins  | 
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            | VF of S. saprophyticus | 
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        | Adherence to uroepithelium Microbistatic to GP & GN Urease-ultimately increases pH cause stone formation allowing more attachment sites for pathogens  | 
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            | P. mirabilis | 
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        | Flagella Urease  | 
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            | Urethritis | 
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        | LUT -Dysuria(painful urination)  | 
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            | Cystitis | 
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        | LUT Bladder -Rapid onset of dysuria;^urgency/frequency -Cloudy urine(pus or bacteria);blood  | 
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            | Prostatitis | 
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        | LUT Prostate -dysuria, ^frequency, low back pain, fever  | 
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            | Pyelonephritis | 
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        | UUT Renal parencyma -Cystitis+more sever FEVER -Septicemia, loss of renal function  | 
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            | How to collect urine samples | 
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        | Voiding(midstream) Urinary catheter Suprapubic bladder aspiration  | 
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            | How do you distinguish cystitis from pyelonephritis? | 
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        | Pyelonephritis includes sever fever | 
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            | What is consider clinically significant bacteriuria? | 
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        | 10^5 cells | 
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            | What MO helps protect the vagina & how? | 
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        | Lactobacili because it secretes acid=lower pH=barrier against infection | 
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            | Incurable STD's | 
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        | HumanPapillomavirus Herpes Simplex Virus HIV Haemophilus ducreyi  | 
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            | Human Papilloma Virus | 
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        | HPV-Genital warts -Attach via capsid protein, enter via RME Pathology-Dyplasia(abnormal growth) -Associated with cervical neoplasia  | 
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            | Reading HPV PAP | 
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        | -Less cytoplasm=more sever dysplasia -Mildly ^nuclear to cytoplasm ratio  | 
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            | Chlamydia trachomatis | 
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        | Non-gonococcal urethritis E-Abrasions A-Receptors on host cell, parasite-induced endoytosis S-asymptomatic or urethritis C-infertility also PID, ectopic pregnancy txt-tetracycline etc  | 
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            | Candida albicans | 
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        | Yeast infection -Part of normal microbiota T-disruptions to bacterial vagina community results in overgrowth with yeast S-UTI, burning/cottage cheesy discharge Balanitis(inflammation of glans penis) txt-antifungal  | 
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            | Trichomonas vaginalis | 
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        | Vaginitis-Protozoa E-Vagina in women; Urethra/Prostate in men S-Vaginitis, yellow/green frothy discharge. Rise in vaginal pH txt-metranidazole  | 
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            | Herpes Simplex Virus types 1 & 2 | 
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        | Genital Herpes E-Membrane fusion P-Causes host cells to fuse together forming giant cells. S-Genital lesion vesicles->ulcer w/tender, swolen nodes, fever, headache, malaise -Remains latent in root ganglion -Can reactivate due to stress, trauma or sun  | 
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            | Neisseria gonorrhoea | 
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        | Gonorrhea -Women have 20% chance of passing; Men 50-90% E-Mucous membranes A-Common pilus, Opa proteins. Invade non-ciliated e cells P-LPS & Enzymes -Neonatal blindness TXT-Treat for gonorrhea (Cefixime & Ciprofloxacin) & Chlamydia  | 
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            | AIDS/HIV | 
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        | Disease of immune cells-CD4(Macrophages & Th) | 
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            | Treponema pallidum | 
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        | Syphilis E-abrasions S- Chancre 2-4 weeks postinfct Primary-bacteria multiply in nodes causing swelling Seconary- Bacteria multiply causing lesions. Most cured some become latent Tertiary-Host cell-mediated response causes progressive destruction of neuro-, cardio-, skin, and joints Txt-arsenic, penicillin,  | 
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            | Gastritis | 
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        | -Inflammation of the stomach -Pain in upper abdomen -Bleeding  | 
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            | Gastroenteritis | 
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        | -Inflammation of stomach & intestines -Diarrhea, nausea, vomiting, crampy abdominal pain  | 
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            | Colitis | 
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        | Intestinal syndrome that primarily involves the colon or large intestines | 
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            | Enterocolitis | 
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        | Inflammation of mucosa of both large & small intestine=dysentery-diarrhea often contains blood & mucus | 
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            | Hepatitis | 
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        | Caused by liver damage Patients become jaundiced due to bilirubin build up in the body  | 
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            | How do pathogens cause disease in the GI tract? | 
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        | 1) Action of toxins 2) Adherence to & effacement of microvilli=>inflammation 3) Invasion of intestinal epithelial cells  | 
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            | Enterotoxin | 
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        | Results in net secretion w/out intestinal damage | 
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            | Cytoskeleton-altering toxin | 
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        | Alters cell shape, may injure cells but not lethal | 
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            | Cytotoxin | 
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        | Causes cell damage and ultimately cell death | 
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            | Neural toxin | 
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        | Alters smooth muscle activity in intestines | 
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            | What causes bacterial food poining? | 
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        | Ingesting preformed toxins; not infections | 
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            | Bacteria responsible for food poisoning | 
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        | Clostridium botulinum-botulism. Staphylococcus aureus-most common. Starts 30 mins-8hrs post ingestion. Resolves in 24 hrs. Bacillus cereus-Emetic. Starts 1-5hrs after ingestions. Lasts 1-6 hrs  | 
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            | Pathology of Vibrio cholera | 
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        | S-Contaminate water P-1. Ingest large numbers>10^8 2. Flagella allows Vibrio to reach epithelial cells 3. Attachment by way of fimbriae to receptors on brush border & crypt cells of small intestine 4. Damage due to production of CXT(A & B subunits). Disrupts adenylate cyclase. CXT=enterotoxin, neurotoxin, & cytotoxin 5.Secretion of large quatities of Cloride ion ino intestine. Water and sodium ion follow=hypersecretion of fluids & electrolytes  | 
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            | Symptoms of Cholera | 
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        | Extreme diarrhea, rice water stool Dehydration & electrolyte imbalance=cardiac failure Txt-Fluid & electrolyte replacement  | 
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            | What mechanism do ETEC(Enterotoxigenic E. coli) and B. cereus use to cause disease? | 
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        | Both colonize epithelial surfaces of small intestine & then release toxins. Do not enter cells. | 
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            | What mechanism does Shigella use to cause disease? | 
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        | Atrach to and enter epithelial cells. Multiply intracellularly & destroy(efface) mirovilli of epithelial cells and induce diarrhea | 
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            | Pathology of Shigella | 
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        | S- Contact w/feces from infected person P-1. descending infection of intestine. Small intestine then colon. 2. Capsule, secretes enterotoxin=watery diarrhea 3. Adhere to cells of colon using Outer membrane proteins 4. Use M cells of GALT and enterocytes to transport Shigella across intestinal epithelium using endocytosis. 5.Escape from phagolysosome 6. Triggers macs to produce IL-1 also triggers apoptosis 7. IL-1 induce inflammation & stimulates edema & extravasation of neutrophis across epithelial barrier 8. Movement of PMNs destroys barrier allowing shigella to move across in mass 9. Further prod. of cytokines & intense inflammation w/destruction of epithelium=>ulcerations=>blood in stool  | 
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            | Symptoms of Shigella infection | 
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        | Blood and pus filled diarrhea Self limiting 2-3 days  | 
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            | What other baacteria share the disease mechanism of Shigella? | 
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        | EHEC Yersinia enterocolitis Entamoeba histolytic Rotavirus/Norwalk virus  | 
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            | Salmonella enteritidis, S. typhmuium Salmonella typhi, paratyphi  | 
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        | Salmonellosis Typhoid fever Pathology: 1. Ingest lots of cells 2. Attach to fibronectin of epithelial cells of small intestine 3. Transported by M cells to GALT 4. Invade gut wall=ulcers adn hemorrhage. Spread to intestinal lymphatics & are phagocytized by macs 5. Produces toxin that ^cAMP & fluid secretion=loose, watery diarrhea & nausea 6. Causes influx of PMN that confines infection to GI 7. OR influx of macrophages which resuls in systemic spread.  | 
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            | What mechanism do S. enteritidis & S. typhi use to cause disease in the GI? | 
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        | Attaches, enters & multiplies in deep tissues that are normally sterile-submucosal or subepithelial tissues sometimes will spread systemically | 
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            | What mechanism do Hepatitis A virus, Reoviruses & Enteroviruses use to cause disease in the GI? | 
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        | Attaches, enters & multiplies in deep tissues that are normally sterile-submucosal or subepithelial tissues sometimes will spread systemically | 
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            | Character of Meningitis | 
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        | High fever, headache, stiff neck | 
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            | How do MO get to the CNS? | 
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        | 1. From the bloodstream-cross the BBB (Bacterial meningitis) 2. From peripheral nerves (Herpes, VZV, rabies) 3. Invasion from bone/sinuses/middle ear 4. Trauma  | 
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            | Encephalitis | 
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        | Acute febrile illness Changes in mental state consciousness behavior  | 
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            | Bacterial Meningitis | 
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        | Acute-nearly always fatal Neonates: E.coli, Group B strep 1mo to 5 yrs: Haemophilus influenzae type B 5 to 40 yrs: Neisseria meningitidis 30 and over:S. pneumoniae  | 
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            | Viral meningitis | 
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        | Self-limiting/non-fatal 1. Enteroviruses 2. Arboviruses 3. HIV 4. HSV-2  | 
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            | CSF of bacterial meningitis vs viral | 
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        | Bacterial-elevated:neutrophils, protein. Decreased: glucose Virus Elevated:lymphocytes, protein. Normal glucose  | 
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            | Viral encephalitis | 
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        | Very severe 1. Arboviruses 2. HSV-1 3. Eneroviruses, mumps 4. Rabies(Rhabodovirus)  | 
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            | Protozoan encephalitis | 
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        | Amebic encephalitis-Naegleria fowleri African Sleeping Sickness-Trypanosoma  | 
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            | Abscess | 
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        | Localized collection of pus | 
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            | Why are MOs in abscesses difficult to treat with antimicrobial agents? | 
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        | 1. Microbes aren't multiplying 2. Chemical nature of pus interferes with action of some antibiotics 3. Hard to reach site due to lack of vessel penetrations  | 
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            | Scalded skin syndrome | 
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        | Strains of S. aureus with lysogenic phages Causes splitting in deep layers=40% of outer skin layers are lost=loss of body fluid, high fever, and bacteremia  | 
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            | Nectrotizing fasciitis/Flesh eating Strep | 
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        | GAS infected by phage Subdermal tissues 2 toxins-Pyrogenic toxin A: superantigen-IL2 Exotoxin B-destroys tissues by breaking down protein 1in/hr  | 
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            | Exanthems | 
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        | Viral diseases resulting in skin rashes | 
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            | Measles | 
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        | Rubeola virus | 
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            | Scarlet Fever | 
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        | s. PYOGENES | 
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            | German measles | 
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        | Rubella virus | 
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            | Disease 5/Erythema infectiosum | 
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        | Parovirus B19 | 
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            | Diseae 6/Roseola infantum | 
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        | Human Herpesvirus 6 | 
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            | Most dangerous pathogen of burn damaged skin | 
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        | P. aeruginosa GNR/Ox+  | 
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            | Sites of action of antimicrobials | 
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        | 1. Cell wall synthesis  2. Cell membrane function 3. Nucleic acid synthesis or replication 4. Bacterial ribosome and protein synthesis 5. Metabolic pathways  | 
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            | Ciprofloxacin | 
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        | Quinolline DNA replication  | 
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            | Sulfamethoxazole | 
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        | Sulfonamide Antimetabolites  | 
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            | Tetracycline | 
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        | Tetracyline Protein synthesis  | 
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            | Gentamicin | 
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        | Aminoglycoside Protein synthesis  | 
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            | Cephalothin | 
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        | Beta Lactam cell wall synthesis  |