BIO 6 Denise lim Cabrillo college – Flashcards
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| Coccus |
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| Spherical |
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| Diplococci |
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| paired spheres |
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| streptococci |
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| chain-links/strands of spheres |
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| tetrads |
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| four spheres in one plane |
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| sarcinae |
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| 8 spheres in cubic structure |
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| staphylococci |
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| Clumps of spheres |
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| Bacillus |
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| rod-shaped |
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| diplobacilli |
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| pairs of rod shaped cells, end to end |
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| streptobacilli |
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| chain-links/strands of rods |
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| coccbacilli |
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| cells in between spherical and rod-shaped |
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| vibrio |
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| curvy, like a comma |
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| spirillum |
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| corkscrew shaped, NOT wormlike |
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| spirochete |
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| corkscrew shaped, wormlike |
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| cell wall (3 functions) |
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| -rigid -protective - prevents osmotic lysis -vulnerable to some antibiotics |
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| primary structure of gram postive cell wall |
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| -thick layer peptidoglycan |
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| peptidoglycan is made up of |
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| mainly carbohydrates with some proteins |
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| structure of peptidoglycan |
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| carbohydrate rods cross linkes with short polypeptide (protein) chains; like woven fabric or chain link fence |
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| Gram positive cell wall stains what color? |
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| purple |
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| how do gram positive and gram negative cell structures get their name? |
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| staining technique |
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| structure of gram negative cell wall (2) |
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| -outer membrane -thin layer of peptidoglycan |
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| The outer membrane of a gram negative cell wall has these components (3) |
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| -lipoprotein |
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| Gram negative cell wall stains what color? |
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| pink/orange |
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| Types of cell walls (not gram positive or gram negative) (3) |
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| -Acid fast -archaea -wall-less |
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| Name two types of glycocalyx |
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| -slime -capsule |
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| 4 functions of gylcocalyx |
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| -attachment/stickiness -protection from phagocytosis and desiccation -emergency nutrient source -prevents loss of nutrients |
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| Tail-like protuberance for motility |
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| flagella |
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| monotrichous |
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| one polar flagella |
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| lophotichous |
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| two or more flagella at one end |
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| amphitrichous |
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| tuft of flagella at each end of the cell |
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| peritrichous |
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| flagella all around the cell |
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| atrichous |
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| without flagella |
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| endoflagella |
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| flagella inside a sheath (like spirochetes' axial filaments) |
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| 2 parts of the flagella (structure) |
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| -hook -filament |
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| Bacterial movement is called |
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| bacterial taxis |
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| bacterial taxis happens via |
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| run and tumble |
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| aerotaxis |
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| bacterial movement triggered by oxygen sensing |
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| chemotaxis |
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| bacterial movement triggered by chemical sensing |
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| phototaxis |
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| bacterial movement triggered by light sensing |
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| magnetotaxis |
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| bacterial movement triggered by electromagnetic sensing |
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| axial filaments create which motion |
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| corkscrew |
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| axial filaments are found on what kind of bacteria shape |
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| spirochetes |
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| how do axial filaments differ from flagella? (2) |
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| -axial filaments are under an outer sheath -they are found on spirochetes |
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| primary function of pili |
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| transfer DNA from one bacteria to another (sex pilus) |
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| 2 secondary functions of pili |
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| -aids motility -attachment between two cells |
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| f-plasmid |
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| -fertility = F -a non-chromosomal bit of genetic material that allows a bacterial cell to form a sex pilus and transfer genetic material to other bacterial cells |
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| fimbriae function |
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| -attachment between cells and host (improves ability to colonize) |
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| plasma membrane function (4) |
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| -selective permeability -site of respiratory enzymes -site of photosynthetic pigments and enzymes -some antibiotics act here |
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| plasma membrance structure (2) |
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| -phospholipid bilayer -membrane proteins |
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| phospholipid bilayer function |
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| barrier to water soluble molecules |
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| what can pass through plasma membrane/phospholipid bilayer? (2) |
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| -fat soluble molecules -small molecules (water) |
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| name the functions of proteins in the lipid bilayer (2) |
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| -transport proteins -receptors |
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| 3 types of passive transport |
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| -simple diffusion -facilitated diffusion -osmosis |
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| osmosis |
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| water moving from low solute to high solute |
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| simple diffusion |
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| solute moves from high concentration to low concentration (in a cell only fat soluble molecules can cross lipid bilayer) |
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| facilitated diffusion |
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| solute moves from high concentration to low concentration (but in a cell needs a transport protein to get across lipid bilayer) |
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| hypotonic |
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| solution outside cell is lower concentration; fluid moves into the cell |
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| hypertonic |
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| solution outside cell is higher concentration; fluid moves out of the cell |
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| isotonic |
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| solution inside and outside the cell are at equal concentrations |
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| plasmolysis |
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| -caused by hypertonicity -plasma membrane shrinks away from cell wall |
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| active transport |
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| -moving from low concentration to high concentration -requires a protein pump -requires energy |
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| nucleoid |
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| the area of the cell with genetic material; has no membrane |
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| bacterial chromosome is part of what organelle |
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| nucleoid |
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| Where is the DNA in bacteria stored |
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| on the chromosome in the nucleoid |
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| plasmid |
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| contains non-essential genetic material |
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| ribosomes function |
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| synthesizes protein |
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| ribosome structure |
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| made up of two subunits |
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| metachromatic granules |
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| inclusion storing phosphate |
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| carboxysomes |
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| inclusion containing CO2 fixing enzyme |
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| gas vacuoles |
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| inclusion providing bouyancy in water |
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| magnetosomes |
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| inclusion creating electromagnetism |
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| endospores |
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| protective dormant genetic spores that survive hostile environments for the survival of the species. |
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| endospores are formed by: |
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| duplicate DNA segregates to one part of the cell, which gets surrounded by a separate plasma membrane and then peptidoglycan creates a protective coating for when cell dies |
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| anabolic processes |
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| metabolism requiring energy input |
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| catabolic processes |
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| metabolism creating energy output |
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| examples of anabolic processes |
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| -synthesis of large molecules within the cell -active transport -movement |
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| examples of catabolic processes |
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| -degradation of large molecules for fuel |
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| metabolism requires |
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| energy (ATP) |
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| endergonic |
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| reactions that store energy |
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| exergonic |
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| reactions that release energy |
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| substrate level phosphorylation |
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| transfer of phosphate from one molecule to another -endergonic |
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| oxidative phosphorylation (ETC) |
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| transfer of electrons from higher to lower energy level |
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| enzymes are integral to metabolism because |
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| they lower activation energy for reactions |
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| prokaryote characteristics (2) |
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| -no internal membranes/organelles -single cell organisms |
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| eukaryote characteristics (2) |
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| -has internal membranes/organelles -multi cell organisms |
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| element (2) |
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| -pure chemical substance -# of atoms is # of protons |
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| atom (2) |
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| -has nucleus with neutrons and protons -has electrons in shells |
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| proton |
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| positively charged subatomic particle |
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| electron |
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| negatively charged subatomic particle -has kinetic energy |
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| neutron |
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| neutrally charged subatomic particle -change # of neutrons to create isotopes |
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| which subatomic particle has kinetic energy? |
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| electron |
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| ion |
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| charged particle |
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| anion |
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| negatively charged ion |
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| cation |
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| postively charged ion |
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| covalent bonds (2) |
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| -atoms share electrons -each pair of electrons creates one bond |
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| ionic bonds (3) |
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| -ions are attracted to each other because of opposite charges -form crystals -broken down by water because it is polar |
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| which type of bonds are broken by water |
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| ionic |
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| hydrogen bonds |
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| -happen between polar molecules -temporary/weak bonds |
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| pH |
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| measurement of H+ concentration |
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| How do acids preserve food? |
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| high H+ concentration disrupts hydrogen bonding and destroys protein shape |
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| hydrophobic |
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| fat soluble |
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| hydrophilic |
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| water soluble |
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| amphipathic |
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| part of the molecule is hydrophobic, part of the molecule is hydrophilic |
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| inorganic molecules |
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| no C-H bonds |
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| organic molecules |
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| have C-H bonds |
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| monomers |
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| single molecule |
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| polymers |
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| multiple molecules joined together |
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| breakdown of polymers into monomers |
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| hydrolysis; water splits apart and polymer splits apart, parts reassemble into several simpler molecules |
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| formation of polymers |
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| dehydration synthesis; water released |
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| carbohydrate formula |
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| n(CH2O) |
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| carbohydrate function (2) |
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| -energy storage -structure |
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| carbohydrate monomer |
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| monosaccharide |
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| carbohydrate polymer |
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| polysaccharide |
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| 3 simple monosaccharides |
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| -glucose -fructose -galactose |
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| 3 disaccharides |
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| -sucrose -maltose -lactose |
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| 3 polysaccharides |
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| -starch -glycogen -cellulose |
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| starch |
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| -found in plants |
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| glycogen |
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| found in animal tissues |
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| peptidoglycan |
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| structural component of bacterial cell wall |
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| lipids structure |
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| long chain hydrocarbons |
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| lipid function (2) |
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| -energy storage -structure (cell membranes) |
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| lipid monomer |
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| fatty acid |
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| lipid polymers (2) |
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| -triglycerides -phospholipids |
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| saturated fat (3) |
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| -all C-C bonds are single bonds -fatty acids are straight -form solids at room temperature bc they stack well |
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| unsaturated fat (3) |
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| -C-C chain contains double bonds -fatty acids are bent from double bonds -form liquids are room temperature |
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| triglyceride structure |
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| three fatty acids linked to glycerol |
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| phospholipid structure (2) |
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| -2 fatty acid chains are hydrophobic -phosphate is hydrophilic |
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| phospholipid function (3) |
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| -plasma membrane -lipid bilayer -outer membrane of gram negative cell walls |
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| protein function (4) |
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| -structure -enzymes -functional proteins -energy |
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| protein monomers |
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| amino acid |
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| protein polymers |
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| peptides or proteins |
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| amino acid structure (4) |
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| -Amine group (NH2) -carboxylic acid (COOH) -H atom -R group |
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| protein structure (primary) |
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| polypeptide strand (amino acid sequence) |
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| protein structure (secondary) |
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| -folding of peptide chain in a portion of a protein -involves H-bonding -helix (coil, has give) OR pleated sheet (tensile strength) |
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| protein structure (tertiary) |
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| 3D folding of full protein -includes intramolecular bonds -disulfide bonds; ionic bonds; hydrophophic interactions |
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| protein structure (quarternary) |
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| two or more complete proteins bonding to each other -includes intermolecular bonds like H bonds |
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| Nucleic acid monomer |
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| nucleotide |
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| Nucleic acids function (2) |
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| -information (DNA, RNA) -energy (ATP) |
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| Nucleic acid polymer |
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| DNA, RNA |
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| Nucleic acid structure (3) |
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| -sugar -phosphate -nitrogenous base |
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| DNA nitrogenous bases |
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| A, T, C, G |
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| RNA nitrogenous bases |
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| A, U, C, G |
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| sugar-phosphate backbone |
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| the structure of DNA/RNA, with nitrogenous bases attached that give genetic information |
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| DNA structure (3) |
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| -sugar-phosphate backbone -nitrogenous bases (A, T, C, G) -double stranded helix |
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| RNA structure (3) |
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| -sugar-phosphate backbone -nitrogenous bases (A, U, C, G) -single genes |
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| RNA function |
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| -copy proteins |
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| ATP |
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| adenosine triphosphate |