MicroCore2 – Flashcards
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Unlock answersViral membrane |
trilaminar phospholipid membrane derived from host cell |
Matrix proteins |
involved in nucleocapsid assembly |
Virus associated enzymes |
-ssRNA or -dsDNA virus must carry a RNA-dependent RNA polymerase associated with or within capsid |
Epidemiological classification of viruses |
based on transmission route |
biochemical classification of viruses |
based on structure and composition |
Growth Cycle of viruses |
a) Attachment (basis of specificity) b) Penetration (receptor-mediated endocytosis and membrane fusion) c) Uncoating (location and mechanism) d) Replication (location of viral protein and of viral nucleic acid biosynthesis) e) Assembly (location) f) Release (cell lysis vs budding) |
DNA-containing viral genomes |
(most replicate within nucleus, synthesize early and late mRNAs, and encode a DNA-dependent DNA polymerase, but not a DNA-dependent RNA polymerase). Notable exceptions on next slide |
DNA genome exceptions |
i) Papillomaviruses and Polyomaviruses - does not encode a viral DNA-dependent DNA polymerase ii) Parvoviruses - does not encode a viral DNA-dependent DNA polymerase; no temporal control of translation of viral proteins iii) Poxviruses - core contains a DNA-dependent RNA polymerase, replicates within core and in cytoplasm iv) Adenoviruses - no exceptions v) Herpesviruses - encodes a thymidine kinase, three classes of RNA transcripts - alpha, beta and gamma transcripts. vi) Hepadnaviruses - replicates in cytoplasm, contains a reverse transcriptase, DNA genome is replicated via a RNA intermediate, DNA replication occurs within cores, no temporal control of translation of viral proteins.
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RNA containing viral genomes |
all encode a RNA-dep polymerase; most replicate in cytoplasm and synthesize transcripts at same time |
RNA-containing viral genomes exceptions/features |
i) Double-stranded RNA viruses - early and late transcripts, replication of genome occurs within cores using positive-strand RNA as template. ii) Positive-stranded viruses - genome is synthesized using negative strand viral RNA as a template; translation results in polyproteins which are cleaved to form RNA polymerases and viral proteases. Togaviruses synthesize early and late RNA transcripts. iii) Negative-stranded viruses - nucleocapsid contains a RNA-dependent RNA polymerase which synthesizes a positive strand RNA for translation and as a template for synthesis of genome. Orthomyxoviral genomes replicate in nucleus using cellular RNA as primer and virions assemble in cytoplasm iv) Retroviruses - nucleocapsid contains a RNA-dependent DNA polymerase and an integrase. The virion RNA is a template for the synthesis of a DNA copy. The viral double-stranded DNA integrates into the host's chromosome. Transcription of the integrated viral DNA results in viral RNA that serves as progeny genomes and is used for translation. Viral polyproteins are cleaved by viral proteases to form virion proteins including the RNAdependent DNA polymerase and integrase. ; ; |
Alpha and Beta Interferon |
(1) Encoded by cellular gene (2) Transcription occurs upon viral infection, associated with viral nucleic acid replication (3) Binds to specific receptor proteins on cell membrane, accounting for species specificity (4) Induction of interferon-inducible proteins by signal transduction and phosphorylation of cellular transcription factors (5) Activation and functioning of the interferon inducible enzymes requires viral doublestranded RNA and ATP (6) Functions of interferon-inducible 2'-5' adenylate synthetase and of the interferon inducible protein kinase |
Acyclovir |
Anti-viral inhibits polymerase activity by causing chain termination; nucleoside analog (derivatives of acyclovir include valacyclovir, penciclovir, famciclovir) (i) Specifically phosphorylated by herpesvirus thymidine kinase. (ii) Preferentially inhibits herpesviral DNA-dependent DNA polymerase |
Ganciclovir |
nucleoside analog anti-viral inhibits viral polymerase activity by causing chain termination (i) Used in treatment of cytomegaloviral retinitis in AIDS patients. Specific inhibition of viral DDDP (ii)Phosphorylated by CMV protein kinase homologue, then to the triphosphate form by cellular kinases |
Azidothymidine (AZT) |
anti-viral nucleoside analog inhibits viral polymerase by causing chain termination (i) Phosphorylated by cellular enzymes (ii)Inhibits HIV reverse transcriptase (iii) Other nucleoside analogs that inhibit HIV reverse transcriptase (and in some cases HBV): dideoxyinosine, dideoxycytidine, lamivudine, emtricitabine, adefovir |
Acyclic nucleoside phosphonates |
nucleoside analog anti-viral inhibits viral polymerase via chain termination (e.g. cidofovir for CMV, tenofovir for HIV and HBV) ; |
Telbivudine and entecavir |
nucleoside analog anti-viral inhibits viral polymerase;via chain termination (i) Phosphorylated by cellular enzymes and inhibits HBV DNA polymerase (for chronic HBV infection |
Ribavarin |
Causes errors in replication and transcription; nucleoside analog anti-viral ;- inhibits respiratory synctial virus; also inhibits nucleoside biosynthesis and formation of the mRNA 5' guanosine cap |
Trifluridine (trifluorothymidine, TFT) or Idoxyuridine |
nucleoside analog anti-virral causes error in replication and transcription thymidine analog, phosphorylated by cellular enzymes, topical administration |
non-nucleoside analog anti-virals |
(1) Foscarnet - Binds to the pyrophosphate binding site of the herpesvirus DNA polymerase and inhibits the viral DNA polymerase activity. Does not require phosphorylation to be active. Treatment of CMV retinitis in AIDS patients. (2) Efavirenz, nevirapine, and delavirdine - noncompetitively inhibits HIV-1 reverse transciptase by binding to the enzyme; does not require phosphorylation to be active |
Anti-virals inhibiting uncoating |
Amantadine and Rimantadine (influenza A) |
anti-virals affecting enzymatic function of viral proteins |
Protease Inhibitors (e.g. saquinavir, indinavir, nelfinavir, ritinavir) - Binds to active site of the HIV protease inhibiting the cleavage of HIV polyproteins. ii) Neuraminidase Inhibitors (zanamivir, oseltamivir) - competitive inhibitor of sialic acid binding, prevents the functioning of neuraminidase and the formation of infectious progeny virions |
Fusion inhibitor anti-viral |
(enfuvirtide): blocks HIV fusion with host cell by binding to gp41 (for HIV in combination with other drugs) |
CCR5 co-receptor antagonist |
maraviroc [Selzentry]): blocks HIV binding to the chemokine receptor CCR5 |
Integrase inhibitor anti-viral |
(raltegravir [Isentress]): blocks incorporation of HIV DNA into host genome |
Adenovirus |
Characteristics: naked icosahedral capsid (hexon, hexon-associated proteins, fiber [attachment, hemagglutination] penton base [cytotoxic], core proteins [no enzymes]), genome dsDNA Replication: in nucleus; early, and late transcripts; release by cell lysis Pathogenesis: lytic or latent infections; transmission by aerosols, direct contact, fecal/oral; human reservoir Infections: acute febrile pharyngitis, atypical pneumonia, acute respiratory disease, pertussis-like syndrome, pharyngoconjunctival fever, epidemic keratoconjunctivitis, acute hemorrhagic cystitis, gastroenteritis (diarrhea in infants) Control/prevention: none
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Bunyaviridae (Bunyavirus, Hantavirus) |
(envelope with 2 types of glycoproteins (G1 & G2); genome composed of 3 neg pol RNA strands (large [L], medium [M], small [S]); L codes for RNS-dep- RNA pol (found in nucleocapsid), M codes for envelope glycoproteins and a nonstructural protein, S codes for nucleocapsid and a nonstructural proteinenvelope; replication in cytoplasm; bud into golgi and released by exocytosis or cell lysis)
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Bunyavirus |
(major strains: California encephalitis virus, La Crosse encephalitis virus) Pathogenesis: Replicates in (transovarian transmission) and transmitted by mosquito (vector); squirrels, chipmunks major reservoirs Infections: subclinical, mild febrile disease, meningitis, encephalitis Control/prevention: control vector |
Hantavirus |
(major strain: Sin Nombre) Pathogenesis: mice major reservoir (strains are species-specific); transmitted by mouse saliva, urine, feces Infections: pulmonary syndrome (pulmonary edema), hemorrhagic fever renal syndrome (not in U.S.) Control/prevention: control reservoir |
Coronavirus |
Characteristics: enveloped, helical nucleocapsid symmetry; 1 segment pos pol RNA genome; E2 protein (attachment), E1 protein (matrix for assembly), E3 protein (hemagglutinin on some strains), L protein (RNA-dependent-RNA polymerase (synthesizes neg pol template RNA; early protein during replication), N protein (nucleocapsid) Replication: replication and assembly in cytoplasm; neg pol template strand made from which several mRNAs and progeny genomes are made; bud into ER for assembly; released through golgi Pathogenesis: peak late winter through early spring; transmitted by aerosols, hand to hand, object to hand; infects mostly URT epithelial cells; inflammation and cytokines contribute to pathogenesis. Reinfections possible Infections: cold (with pharyngitis), pneumonia, gastroenteritis Control/prevention: none SARS-associated Coronavius causes a spectrum of symptoms from mild to severe lower respiratory |
Flaviviridae |
(genus Flavivirus ; St. Louis Encephalitis virus, Dengue virus, Yellow Fever virus, Japanese encephalitis virus, West Nile virus) Characteristics: similar to Togaviridae except envelope derived from intracytoplasmic membranes Replication: similar to Togaviridae except all of genome translated into one protein that is processed into |
Flavivirus pathogenesis |
1. St. Louis Encephalitis : transmitted by mosquito; bird reservoir; infects reticuloendothelial tissue, then viremia and dissemination to CNS 2. Dengue virus: transmitted by mosquito and vertically to neonate; primate and mosquito reservoir; infects reticuloendothelial tissue, then viremia (virus circulates in blood cells) with dissemination to many tissues; inflammatory cytokines associated with pathogenesis and symptoms. 3. Yellow Fever virus: transmitted by mosquito; primate reservoir; pathogenesis similar to Dengue except hepatitis, nephritis and circulatory failure more prominent. 4. Japanese encephalitis virus : transmitted by mosquito; pigs and aquatic birds main reservoir 5. West Nile virus : transmitted by mosquito; crows and aquatic birds main reservoir |
Flavivirus Infections |
1. St. Louis encephalitis virus : fever & headache, meningitis, encephalitis 2. Dengue virus : Dengue fever (self-limited disease), Dengue hemorrhagic fever, Dengue shock syndrome 3. Yellow fever virus : self-limited disease, hemorrhagic form 4. Japanese encephalitis virus : asymptomatic or encephalitis 5. West Nile virus : same as St. Louis encephalitis virus Control/prevention: control vector; vaccine for Yellow fever virus and Japanese encephalitis virus |
Hepatitis A |
(~ 20 strains) (family Picornaviridae) Characteristics: like Enterovirus but more resistant Replication: like Enterovirus but infects hepatocytes Pathogenesis: fecal/oral and common-source transmission; humans only significant reservoir; incubation 2-6 wks; portal inflammation and periportal necrosis (mediated by virus and CMI); no carriers or chronic disease Infections: Hepatitis (acute) Control/prevention: block transmission; passive or active immunizations; single vaccine or vaccine for both HAV and HBV (Twinrix) |
Hepatitis B |
(family Hepadnaviridae) Characteristics: enveloped; circular partially dsDNA genome; Major antigens: HBsAg (envelope protein), HBcAg (core/capsid protein), HBeAg (truncated core protein); core has reverstranscriptase Replication: replicates in hepatocytes; dsDNA synthesis completed in core, DNA to nucleus; following transcription and translation, RNA pregenome enclosed in progeny core; RNA pregenome serves as template for synthesis of neg pol DNA strand, then partial synthesis of pos DNA strand; buds into golgi and released by exocytosis Pathogenesis: blood, sex, direct contact, transplacental or during birth transmission; portal and periportal necrosis (mediated mostly by inflammatory infiltrate) that may lead to fibrosis and cirrhosis; estimated that 1 million are carriers; humans most significant reservoir; incubation 1 to 4 months (avg 8 wks) Infections: Hepatitis (subclinical; acute, self-limited; chronic persistent; chronic active; cirrhosis; hepatocellular carcinoma) Control/prevention: block transmission; passive or active immunizations (see HAV above); α IFN plus reverse transcriptase inhibitor (adefovir, lamivudine, entecavir, or tenofovir) or telbivudine for chronic infection 21 |
Hepatitis D |
(genus Deltavirus ) Characteristics: satellite virus that co-infects with HBV; enveloped; circular ssRNA genome; HDVAg is core protein; requires HBsAg for replication Replication: replication in hepatocytes completed only in presence of HBV Pathogenesis: exacerbation of HBV infection Infections: coinfection with HBV yielding fulminant hepatitis with death (~4%) or recovery with immunity (~90%); superinfection of HBV carriers yielding fulminant hepatitis with death (~10%), acute hepatitis with recovery (~10%), or chronic HBV/HDV hepatitis with cirrhosis (~80%) Control/prevention: block transmission; α IFN
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Hepatitis C virus |
(family Flaviviridae) Characteristics: enveloped; pos pol RNA genome; E1 and E2 envelope proteins; genome codes for 2 proteases and a RNA-dep-RNA-pol Replication: similar to other Flaviviruses; genome encodes for a polyprotein that is cotranslationally processed into at least 10 proteins; may replicate in cells other than hepatocytes; multiple genetic variants recovered from single individual Pathogenesis: transmitted predominantly by blood (transfusions, iv drug use); high percentage (~80%) of infections become chronic; incubation 2-26 wks (avg 6-12 wks); characterized by inflammation with fibrosis Infections: Hepatitis (acute with resolution [~15%], chronic [~85%] that is stable [~80%] or results in cirrhosis [~20%][stable, progressive with death, or hepatocellular carcinoma]) Control/prevention: block transmission; chronic treated with α IFN or α IFN + ribavirin |
Hepatitis E virus |
(genus Hepevirus, family Hepeviridae ) Characteristics: non-enveloped; pos pol ssRNA genome Pathogenesis: pathogenesis and transmission like HAV; incubation 4-8 wks; infects a number of mammals but humans probably main reservoir for human strain-associated infection Infections: Hepatitis (acute) with a high mortality in pregnant women (~20%) Control/prevention: block transmission
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Herpesviridae |
(enveloped [from nucleus], icosahedral capsid, dsDNA genome, no core enzymes, replication in host nucleus, three phases of protein synthesis: immediate early [alpha proteins], early [beta proteins], late [gamma proteins]; viral-encoded DNA polymerase [a beta protein] replicates the genome; viruses released by budding or cell lysis; human reservoir; envelope proteins for attachment, fusion, and cell trophism)
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Herpes simplex 1 & 2 |
(Human Herpes virus -1 & -2; Alphaherpesvirinae ) Pathogenesis: lytic and latent (in neurons) infections; transmission by saliva, sex, and vesicle fluid; syncytia and intranuclear inclusions occur Infections: gingivostomatitis, pharygotonsillitis, vulvovaginitis, skin infections (whitlow, gladiatorum), eye infections, genital herpes, meningitis, encephalitis, neonatal infection, infection in the immunocompromised, recurrent infections Control/prevention: acyclovir, famciclovir, penciclovir,valacyclovir; topical preparations; cesarean section for overt disease in genital tract
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Varicella-zoster virus |
(Human Herpes virus -3) Pathogenesis: lytic and latent (in neurons) infections; transmission by aerosols (RT droplets) and vesicle fluid; rarely transplacental; syncytia and intranuclear inclusions occur; infects reticuloendothelial tissue then mucous membranes and skin following viremia Infections: chickenpox (varicella), shingles (zoster) Control/prevention: varicella Ig (VariZIG) and vaccines for varicella and zoster, acyclovir for varicella; famciclovir or valacyclovir for zoster |
Epstein Barr Virus (Herpes virus 4) |
Pathogenesis: cellular receptor is CD21 (CR2), MHCII are coreceptors; productive (EBNA, VCA), transforming and latent infections (EBNA, LMPs); transmission by intimate contact (saliva); B cell activation and proliferation (heterophile Abs), 2 phases of lymphocytosis (B cells and Downey cells); IL-10-like protein inhibits Th1 response Infections: heterophile positive mononucleosis (complications), lymphoproliferative disease, neoplastic diseases (Burkitt's lymphoma, Hodgkin's lymphoma, nasopharyngeal carcinoma) Control/prevention: none |
Cytomegalovirus (Herpes virus 5) |
Replication: large nuclear inclusions occur (Owl's eye inclusion bodies); human CMV grows only in human cells Pathogenesis: inhibits expression of MHCI proteins; productive and latent (in many cell types) infections; congenital, perinatal, oral, sexual, blood, and transplants route of transmission Infections: congenital infection (cytomegalic inclusion disease), perinatal infection, heterophile-negative mononucleosis, hepatitis, infection in immunocompromised (pneumonia, chorioretinitis, colitis/esophagitis, CNS) Control/prevention: ganciclovir, valganciclovir, foscarnet, or cidofovir |
Human Herpes virus 6 ; 7 (Roseolovirus) |
Pathogenesis: transmitted by saliva; productive and latent infections; infects mononuclear cells; downregulates MHCI and CD3 expression Infections: Roseola (6th disease, exanthem subitum) in children; adult infection (lymphadenopathy, hepatitis, mono-like syndrome); in immunocompromised (pneumonitis, encephalitis, hepatitis); HHV-7 may cause second cases of roseola Control/prevention: none |
Human Herpes Virus 8 (Rhadinovirus) |
Pathogenesis: latent and lytic infections; latency-associated nuclear antigen important in neoplasia and during latent genome replication Infections: Kaposi's sarcoma Control/prevention: none |
Influenza virus (family Orthomyxovirus; species influenza A, B, C) |
Characteristics: helical symmetry, enveloped, 7-8 negative polarity ssRNA genome; NA (N) and HA (H) envelope proteins (antigenic drifts and shifts) Replication: replicates in nucleus, assembles in cytoplasm; viral RNA-dependent RNA Pol synthesizes pos pol RNA for translation and templates for genome replication Pathogenesis: birds and other animals reservoirs for Inf A; human reservoir for B and C; aerosol transmission; NS1 inhibits antiviral effects of interferons; replication in RT induces desquamation with loss of ciliated epithelium; cytokines and T cells responses contribute to pathogenesis Infections: influenza (complications: influenza pneumonia, bacterial pneumonia, myositis, meningitis, aspirin-associated Reye syndrome), common cold Control/prevention: vaccines; amantadine, rimantadine, zanamivir, oseltamivir
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Marburg and Ebola (family Filoviridae) |
Characteristics: enveloped, helical nucleocapsid symmetry; 1 segment neg pol RNA genome; filamentous and pleomorphic Replication: similar to Rabies; genome codes for 7 proteins Pathogenesis: reservoirs and routes of spread uncertain; probably spread by direct contact or vectors; massive tissue necrosis and hemorrhage; cytokines contribute to pathogenesis Infections: hemorrhagic fever Control/prevention: Possible use of hyperimmune serum |
Arenavirus |
(helical symmetry, enveloped, 2 cirular ssRNA segments as genome; rodent reservoir, rodent urine transmission) Lassa virus : hemorrhagic fever |
Prions |
spongiform encephalopathies associated with the accumulation of insoluble prion proteins leading to progressive dementia and death (Kuru, Crueutzfeldt-Jakob disease variants, Mad cow disease) |
Human Astrovirus 8 serogroups family Astroviridae |
Characteristics: non-enveloped, icosahedral nucleocapsid symmetry; 1 segment pos pol ssRNA genome filamentous and pleomorphic Replication: similar to Noroviruses Pathogenesis: fecal/oral transmission; peak in winter; mostly infects children under 3yr but all can be infected; estimated 4 million cases per yr Infections: gastroenteritis (nausea and diarrhea) Control/prevention: block transmission |
Norovirus (5 serogroups) family Caliciviridae |
Characteristics: non-enveloped, icosahedral symmetry; genome pos pol ssRNA Replication: replicates and assembles in cytoplasm Pathogenesis: transmitted by fecal/oral, aerosol, common source, human to human; many animal reservoirs; estimated 20 million cases per year; infects epithelial cells in jejunum and prevents absorption; peaks in fall and winter; all ages infected Infections: gastroenteritis (vomiting and diarrhea) Control/prevention: control transmission |
Human Papillomavirus Family Papillomaviridae |
Characteristics: non-enveloped, icosahedral symmetry; circular dsDNA genome Replication: in nucleus utilizing host enzymes Pathogenesis: the most common viral STD; transmission by direct contact (lesions or inanimate objects); long incubation; latent and productive infections occur; infection induces epithelial acanthosis, parakeratosis, and hyperkeratosis (inhibits apoptosis); the koilocyte is diagnostic Infections: Papillomas: cutaneous, head and neck, anogenital; cervical cancer Control/prevention: vaccine; chemicals, surgery, imiquimod |
Polyomavirus family Polyomaviridae JC and BK viruses |
Characteristics: similar to the Papillomaviruses Replication: similar to Papilloma viruses except prefer to replicate in the respiratory and urinary tracts (JC and BK) and CNS (JC) Pathogenesis: multiply in respiratory tract then kidney after viremia; latent infection in kidney Infections: JC: progressive multifocal leukoencephalopathy; BK & JC: UTI in immunosuppressed Control/prevention: none |
Paramyxoviridae |
Parainfluenza, Mumps, Measles, Respiratory Syncytial, Metapneumovirus (enveloped [have fusion protein],helical nucleocapsid [NP] symmetry, 1 segment neg pol RNA genome, RNA polymerase in core, matrix protein, replicate in cytoplasm) |
Parainfluenza (HPIV 1,2,3,4A, 4B) |
Characteristics: HN protein (hemagglutinin/neuraminidase for attachment) Pathogenesis: transmitted by aerosols or direct contact; humans only reservoir; replicates in mucosal epithelium of URT; immunity short-lived so re-infections common; Th1 response contributes to path; HPIV-1 and 2 peaks in fall and winter; HPIV-3 all year with peak in spring; HPIV-4 all year Infections: HPIV-1-3: croup, pneumonia, bronchiolitis/bronchitis; HPIV-1-4: cold, otitis media, conjunctivitis Control/prevention: upper airway support |
Mumps virus |
(genus Rubulavirus) Characteristics: like Parainfluenza Pathogenesis: transmitted by aerosols; humans only reservoir; replicates in mucosal epithelium of URT yielding viremia; infects parotids and submandibular glands; also may infect pancreas, testes, ovaries, peripheral nerves, eye, inner ear, and CNS; virus occurs in oral secretions and urine Infections: mumps (parotitis); complications (orchitis, oophoritis, meningitis, encephalitis) Control/prevention: vaccine |
Measles virus |
(genus Morbillivirus ) Characteristics: H protein for attachment Pathogenesis: transmitted by aerosols; humans only reservoir; replicates in URT, then reticuloendothelial tissue yielding viremia; infects conjunctivae, UT, CNS, RT; infection of endothelial cells results in vasculitis; virus occurs in RT secretions, urine Infections: Rubeola (measles); complications (encephalitis, pneumonia, giant cell pneumonia in immunocompromised, subacute sclerosing panencephalitis) Control/prevention: vaccine
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Respiratory Syncytial virus (genus Pneumovirus) |
Pathogenesis: transmitted by aerosols and direct contact (hands); humans only reservoir; replicates in mucosal epithelium of URT then spreads to LRT; incomplete immunity from infection; pathologic change associated with syncytia and inflammation-mediated necrosis Infections: infants and young children: bronchiolitis, pneumonia, tracheobronchitis, croup, otitis media; older children and adults: cold, pharyngitis, tracheobronchitis, pneumonia Control/prevention: Ribavirin for certain situations; Palivizumab (humanized Ab to the F glycoprotein) |
Metapneumovirus |
Characteristics and pathogenesis: like RSV Infections: bronchiolitis and pneumonia in young children; cough, congestion in older children and adults Control/prevention: none |
Parvoviridae |
Human Parvovirus (B19) (genus Erythrovirus) Characteristics: non-enveloped, icosahedral symmetry; ssDNA genome Replication: in nucleus Pathogenesis: aerosol or transplacental routes of infection; infects erythroid precursors; requires mitotically active cells; humans only reservoir Infections: Erythema infectiosum (5th disease) in children; mild disease in adults (polyarthritis); fetal infections and complications (hydrops fetalis); aplastic crisis in those with hemolytic anemias Control/prevention: none |
Picornaviridae |
Enteroviruses, Rhinovirus ( positive polarity ssRNA genome; non-enveloped, icosahedral symmetry; capsid proteins mediate adherence; replication in the cytoplasm, one large protein processed to structural proteins, polymerase, and protease; release by cell lysis; human reservoir)
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Enteroviruses (coxsackie A&B, Echovirus, Enterovirus, Poliovirus) |
Pathogenesis: transmitted by fecal oral, direct contact, or aerosols; initial replication in GIT; humans only reservoir; resistant to low pH, salt, detergents; final target tissue varies with virus (e.g. skin, heart, CNS) Infections: Poliovirus (Poliomyelitis), Coxsackie A (acute febrile disease, meningitis, encephalitis, cold w/ fever, febrile rash {hand, foot and mouth disease, pericarditis, hemorrhagic conjunctivitis, herpangina), Coxsackie B (acute febrile disease, meningitis, encephalitis, cold w/ fever, myocarditis, pericarditis, pleurodynia, transplacental infection), Echovirus A (acute febrile disease, meningitis, encephalitis, cold w/ fever, febrile rashes, diarrhea w/ fever), Enterovirus (hemorrhagic conjunctivitis) Control/prevention: no treatment; vaccine for Poliovirus (IPV now used again in USA, OPV still used in countries with active polio cases) |
Rhinovirus |
Pathogenesis: most infections in early fall & late spring; transmitted by direct contact (hand to hand, object to hand) or aerosols; replication in URT; ICAM-1 host cell receptor; cytokines contribute to pathogenesis Infections: cold, lower RT infection, exacerbation of chronic lung and bronchial diseases (e.g. asthma); recurrent infections Control/prevention: none |
Poxviridae |
Smallpox, Molluscum contagiosum, (complex envelope and symmetry; genome is linear dsDNA; core contains DNA-dependent-RNA pol; replicates and assembles in cytoplasm; release by cell lysis) |
Smallpox |
(genus Orthopoxvirus, species Variola virus) Pathogenesis: humans only reservoir; transmission by aerosols or direct contact; replicates in reticuloendothelial tissue then disseminates to skin and mucous membranes Infections: variola major and minor Control/prevention: no treatment; vaccine (Vaccinia virus; not available to public) |
Molluscum contagiosum virus (Molluscipoxvirus) |
Pathogenesis: transmitted by direct contact including sexual transmission; self-limiting cutaneous lesions occur (umbilicated nodule with caseous plug) Infections: Molluscum contagiosum Control/prevention: no treatment |
Rabies virus (family Rhabdoviridae) |
Characteristics: enveloped, helical nucleocapsid symmetry; 1 segment neg pol RNA genome Replication: replication and assembly in cytoplasm; pos pol template strand made from which progeny genomes are made; several mRNAs made from neg pol strand Pathogenesis: zoonotic disease (common reservoirs are bats, foxes, raccons, and skunks); transmission by bite or scratch or aerosols; virus travels by retrograde axonal transport to CNS then via afferent neurons to eye, skin, salivary glands Infections: Rabies encephalitis Control/prevention: vaccine
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Reoviridae |
Rotavirus, Colorado tick fever virus (non-enveloped, dsRNA genome) |
Rotavirus |
(genus Rotavirus, serogroups A-E) Characteristics: 3 capsid layers and inner core; outer capsid composed of VP4 (host attachment); core contains complete transcription system; genome composed of 11 segments of dsRNA Replication: transcription occurs in inner core, translation in cytoplasm; genome replicated in progeny core using pos pol RNA template; buds into ER, release by cell lysis Pathogenesis: estimated 4 million cases/yr; fecal/oral or human to human transmission (virus survives in environment); humans probably only reservoir; peak age 6mo-2yr but all ages can be infected; infects villus cells in small intestine preventing absorption Infections: gastroenteritis (fever, vomiting, watery diarrhea) Control/prevention: none |
Colorado Tick Fever virus (genus Coltivirus) |
Characteristics: like Rotavirus but outer capsid not as organized (2 capsid layers); genome 12 dsRNA segments Replication: like Rotavirus Pathogenesis: transmitted by wood ticks; small mammals are reservoirs; infects erythroid precursors Infections: Colorado tick fever (relapsing fever, headache, myalgia) Control/prevention: control vector and reservoirs
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Retroviridae |
Human immunodeficiency virus 1 & 2, Human T-cell lymphotrophic 1 (enveloped, 2 identical pos pol RNA stands as genome; proviral DNA integrates into host chromosome; core contains reverse transcriptase, protease, integrase; genome encodes regulator proteins; humans only significant reservoir; transmitted by sex, blood, perinatal [in utero, at delivery, breast-feeding]) |
HIV 1 & 2 (genus Lentivirus) |
Characteristics: envelope proteins gp 120, gp 41 for attachment/entry; inner core (Gag protein p24) Replication: attaches via CD4 and chemokine receptor; envelope fuses, core enters cytoplasm, reverse transcriptase synthesizes DNA; transcripts and progeny genomes synthesized; assembly and buds through plasma membrane; core maturation occurs after release Pathogenesis: chronic infection that induces profound immunosuppression resulting in life-threatening secondary infections; lymphopenia, reduced T-cell activity, and reduced macrophage activity; incubation 1-6 wks before onset of acute retroviral syndrome; routes of transmission like HBV; Infections: AIDS; CDC classification: acute (acute retroviral syndrome ["mononucleosis-like"]), chronic (asymptomatic with persistent generalized lymphadenopathy), final crisis (secondary infections, neurologic disease, secondary neoplastic disease, unexplained constitutional diseases); presentations peculiar to women or children Control/prevention: block transmission; nucleoside RT inhibitors, non-nucleoside RT inhibitors (only for HIV-1), protease inhibitors, fusion inhibitor, integrase inhibitor, and co-receptoer inhibitor (see antiviral section)
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Togaviridae |
Rubella virus, Alphaviruses (enveloped [from cytoplasm], icosahedral symmetry, 1 segment pos pol RNA genome; 2/3 of genome translated into early proteins (protease, RNA-dep-RNA pol); neg pol strand made for genome template and 26S transcript; 26S translated into precursor protein that is cleaved by protease into structural proteins |
Rubella virus (genus Rubivirus) |
Pathogenesis: aerosol transmission; humans only reservoir; infects URT, then 1st viremia, infection of reticuloendothelial tissue then second viremia (fetal infection possible) and immune complex-mediated vascultis (rash) Infections: Rubella (German measles), congenital rubella syndrome Control/prevention: vaccine |
Alphavirus (Eastern Equine, Western Equine, Venezuelan Equine Encephalitis viruses) |
Pathogenesis: transmitted by mosquito; birds (WEE & EEE), rodents reservoirs (VEE) and possibly also amphibians and reptiles; infection of reticuloendothelial tissue then viremia and CNS infection; inflammatory neuronal necrosis Infections: encephalitis Control/prevention: control vector; veterinary vaccines
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Alphavirus-Chikungunya |
(+ssRNA, mosquito-borne) Pathogenesis: acute fever (~2 days @ 40 oC), petechial or maculopapular rash, then headaches, insomnia, photophobia, intense joint pain (resembles Dengue fever), severe prostration lasting several weeks to several months; infection of endothelial cells and macrophages; cytopathic infection results in apoptosis of host cell Diagnosis and treatment: Diagnosis usu. by RT-PCR or by ELISA for anti-CHIKV IgM; currently no vaccine, and no specific treatment; chloroquine may alleviate arthritis symptoms In the news: Typically an African and Asian virus, CHIKV underwent a mutation around 2005 that enabled it to use another species of Aedes mosquito as a vector. This new host has a broader range, and has resulted in primary CHIKV cases in Europe (Italy) and on Reunion Island (France). |
Yeasts |
Single cells that reproduce by budding; some can, under special conditions, form elongated cells that stick together and look like hyphae |
Molds |
(grow as filaments or hyphae [septate or non-septate] and reproduce with specialized structures that bear the conidia or produce conidia within the filament.) (1) Dimorphism is an important trait in many pathogenic fungi. It means that at one temperature (usually 25C), the fungus grows as a mold, and at another temperature (usually 37C) the fungus grows as a yeast |
Fungi cell wall composition |
Usually composed of a mixture of chitin, glucan, and mannan. Yeasts usually only have chitin at the bud scar. The cell wall is a potent immunogen, however the role of Abs in protection is limited. |
Fungal plasma membrane |
Plasma membrane (Fungal plasma membranes contain the sterols ergosterol & zymosterol. Ergosterol and enzymes that synthesize it are the major targets of antifungal drugs.) |
Asexual Reproduction |
Conidia-free spores not enclosed by a spore bearing sac Sporangiospores-formed by successive division within a sac like structure called a sporangium, attached to a stalk called a sporangiophore |
Asexual spores |
Arthrospores-block shaped spores formed when a septate hypha fragments at the crosswall Chlamydospores-thick walled sperical conidium formed by the septate hypha; are resting spores Blastospores-produced by budding from a parent cell that is a yeast or another conidium Microconidium and macroconidium-smaller and larger conidia produced by same fungus (micro=short stalk/one celled) |
Fungal physiology |
(heterotrophic; utilize a variety of carbohydrates [specific for the species] some are strict aerobes, some facultative anaerobes) |
Fungal pathogenesis |
a.Portals of entry (skin, inhalation, GIT, UT, normal flora) b. Virulence determinants (predisposing condition [reduced CMI, underlying disease]; filament vs. yeasts; components immunosuppress and/or evade immune system; extracellular enzymes; induction of proinflammatory cytokines; tissue trophism and adherence; allergic reactions) |
Fungal disease classification |
Disease Classification (1) superficial (Pityriasis versicolor, Tinea nigra) (2) cutaneous (Dermatophytosis) (3) subcutaneous (Sporotrichosis) (4) systemic (a) primary (Coccidioidomycosis, Histoplasmosis, Blastomycosis, Cryptococcosis) (b) opportunistic (Candidiasis, Aspergillosis, Mucormycosis |
Fungal Lab Diagnosis |
a. Microscopy (cotton blue, KOH, methenamine silver stain, periodic acid-Schiff stain) b. Culture (slide culture, birdseed agar for
Cryptococcus, dermatophyte test medium, Sabouraud dextrose agar, biochemical tests c. serum antibody detection; complement fixation test, agar diffusion test, PCR |
Antifungal drugs |
Polyenes, Azoles, Flucytosine, Griseofulvin, Terbinafine, Echinocandins |
Polyenes |
(Nystatin, Amphotericin B [AmB]; bind ergosterol and cause an increase in membrane permeability; nystatin used topically for oral and vaginal candidiasis; AmB used topically and systemically [colloidal complex in desoxycholate or as a lipid complex]; AmB drug of choice for most disseminated fungal infections) |
Azoles |
Azoles (Miconazole, Ketoconazole, Clotrimazole, Itraconazole,Fluconazole, Voriconazole, Posaconazole, Terconazole; inhibit cytochrome P-450 and thus block ergosterol synthesis that results in increased membrane permeability |
Flucytosine |
inhibits DNA synthesis; used systematically in combination with AmB |
Griseofulvin |
disrupts microtubules; used for dermatophyte infections |
Terbinafine |
inhibits squalene epoxidase and thus ergosterol synthesis; used for dermatophyte infections |
Echinocandins |
inhibit glucan synthesis, caspogungin, micafungin, anidulafungin |
Dermatophytes/ agents causeing superficial infections |
(anthropophilic, zoophilic, & geophilic varieties; routes of transmission usually direct contact with spores or spore-laden hair or skin scales; pathogenesis: spores adhere to keratinized tissue, germinate, secrete keratinases, and invade and grow; hair infection may be endothrix or ectothrix pattern; extent of inflammation varies; Th1 response needed to control) |
Dermatophytoses Tinea Pedis |
(infection of foot and toes; "id reaction" (autoeczematization) etiology usually Trichophyton mentagrophytes, T. rubrum, or less frequently Epidermophyton floccosum
; treat topical, itraconazole, terbinafine, fluconazole) |
Dermatophytoses Onychomycosis |
(Tinea unguium; infection of nails; etiology like T. pedis; treat with terbinafine, fluconazole, griseofulvin |
Dermatophytoses Tinea corporis and Tinea faciei |
(infection of the skin and face, respectively; etiology: Microsporum audouinii, M. canis, M. gypseum, T.rubrum, T.verrucosum; treat topical, terbinafine, fluconazole, itraconazole |
Dermatophytoses Tinea barbae |
(infection of the beard; etiology: T. verrucosum, T. mentagrophytes treat topical, terbinafine, fluconazole, itraconazole)
|
Dermatophytoses Tinea cruris |
(infection of the groin; etiology: T. rubrum, E. floccosum; treat topical, terbinafine, fluconazole, itraconazole |
Dermatophytoses Tinea capitis |
(infection of the scalp; etiology T. tonsurans (most common in this country), M. canis, M. audouinii, T. verrucosum; treat griseofulvin, terbinafine, itraconazole |
Superficial infections |
(1)Tinea nigra (infection of the epidermis, usually hands; etiology: Exophiala werneckii; treat topical, ketoconazole, itraconazole) (2) Tinea versicolor (infection of the skin, trunk common; etiology: Malassezia furfur; treat topical selenium sulfide, ketoconazole, fluconazole, |
Sporothrix schenckii (sporotrichosis) |
Characteristics: ubiquitous (especially soil and vegetation) dimorphic fungus; at ambient temps grows as branching septate hyphae with single or clusters of microconidia; at 37C grows as elongated yeasts Pathogenesis: traumatic inoculation of skin with conidia or hyphae; inflammation, induration at site; asending lymphangitis may occur; pulmonary infection initiated by inhaling conidia Infections: lymphocutaneous sporotrichosis, pulmonary sporotrichosis, osteoarticular sporotrichosis, disseminated in AIDS Control: cutaneous with itraconazole; disseminated with amphotericin B |
Coccidioides immitis (coccidioidomycosis) |
Characteristics: found in desert soil (endemic in southern Texas, New Mexico, Arizona, and California); at ambient temps grows as branching, septate, hyphae that forms arthrospores; at 37C forms spherules containing endospores Pathogenesis: ~60% of the infections are asymptomatic; infection initiated by inhalation of arthrospores; pulmonary symptoms generally mild and are associated with inflammatory reaction to spherules; may form cavity or nodular granuloma; may disseminate to skin, bone and joints, and CNS Infections: primary pulmonary coccidioidomycosis, disseminated coccidioidomycosis, primary cutaneous coccidioidomycosis Control: ketoconazole, fluconazole, itraconazole, or amphotericin B for severe infection |
Histoplasma capsulatum |
(var capsulatum and var duboisii) (Histoplasmosis) Characteristics: grows in rich, acidic soil enriched by bird and bat feces (endemic in the Ohio-Mississippi valleys); at ambient temps grows as branching, septate hyphae that form microconidia and tuberculate macroconidia; at 37C grows as small, oval yeasts Pathogenesis: ~90% of cases asymptomatic or mild influenza-like; inhale microconidia, ingested by macrophages, undergoes dimorphic transition; disseminates to reticuloendothelial tissue; a facultative intracellular parasite (in macrophages) Infections: acute primary pulmonary histoplasmosis, chronic (cavitary) pulmonary histoplasmosis, progressive disseminated histoplasmosis (acute and chronic), cutaneous histoplasmosis (African histoplasmosis caused by H. capsulatum var duboisii) |
Blastomyces dermatitidis (Blastomycosis) |
Characteristics: epidemiology similar to H. capsulatum except endemic area larger; grows in rich soil contaminated with bird feces or decaying vegetation; at ambient temps grows as branching, septate hyphae that produce microconidia; at 37C grows as a thick-walled yeast with large-pore buds Pathogenesis: ~50% of infections are asymptomatic; inhale microconidia, dimorphic transition, WI-1 cell wall protein mediates adherence to host cells; yeast cell wall may be antiphagocytic; tissue damage mediated by inflammatory infiltrate; lesions may become granulomatous Infections: primary pulmonary blastomycosis (course may invole complete recovery or become progressive with or without dissemination), chronic pulmonary blastomycosis, disseminated blastomycosis, cutaneous blastomycosis Control: itraconazole or amphotericin B for severe infection |
Cryptococcus neoformans (serotypes D and A) and C. bacillospora (sero B&C) cryptococcosis |
Characteristics: sero A has worldwide distribution, found in areas contaminated with dried bird feces, infects the immunocompromised; C. bacillospora restricted to regions with eucalyptus trees, infects the immunocompetent; grows as a yeast at all temps; prominent polysaccharide capsule; deposits melanin in cell wall when grown on catecols Pathogenesis: capsule is antiphagocytic and immunosuppressive; melanin protects from oxidative damage; small-capsule yeasts inhaled, primary infection established in lung, disseminates to CNS Infections: pulmonary cryptococcosis (acute and chronic), disseminated cryptococcosis (skin, CNS) Control: fluconazole, amphotericin B, or amphotericin B +flucytosine |
Candida albicans |
( C. tropicalis, parapsilosis, glabrata) (Candidiasis) Characteristics (C. alb): grows as yeasts at all temps; at 37C in the presence of inducers forms germ tubes and eventually hyphae (dimorphic transition); on special media forms pseudohyphae and chlamydospores; C. albicans causes ~70% of the candidiasis cases; normal inhabitant of the GIT Pathogenesis: usually requires predisposing condition to cause infection; attachment followed by release of proteases and tissue invasion associated with acute infection; chronic infection often involves formation of granulomas Infections: oral and vaginal candidiasis, intertriginous candidiasis, paronychia, onychia, generalized cutaneous, chronic mucocutaneous, esophagitis, gastrointestinal candidiasis, bronchopulmonary candidiasis, UTI, fungemia, endocarditis,hepatosplenic candidiasis Control: topical (e.g. nystatin, miconazole), fluconazole, posaconazole, amphotericin B, amphotericin B + flucytosine, or echinocandin
|
Aspergillus sp |
(A. fumigatus and A. flavus) (Aspergillosis) Characteristics: A. fumigatus causes ~90% of the infections; common soil fungus, worldwide distribution; thin septate hyphae that typically branch at 45 degree angles; asexual cycle involves formation of conidia on complex conidiophore Pathogenesis: inhale conidia, germinate, hyphae adhere to extracellular matrix proteins, secrete enzymes and toxic secondary metabolites, hyphae invade tissue or grow in cavities; Th1 response induced; immunocompromised at greatest risk Infections: allergic bronchopulmonary aspergillosis, aspergilloma (fungus ball), invasive sinusitis, invasive pulmonary aspergillosis, disseminated aspergillosis Control: voriconazole (drug of choice for invasive disease), amphotericin B, itraconazole, or echinocandin
|
Mucormycosis or Zygomycosis |
( Rhizopus, Absidia, Mucor, Rhizomucor) Characteristics: ubiquitous soil fungi; grow as irregularly shaped, non-septate hyphae with right-angle branches; sporangiospores contained in sporangia Pathogenesis: infections limited to the immunocompromised, diabetics, and trauma; inhale spores, germinate, invade tissue and blood; results in tissue necrosis, thrombosis Infections: rhinocerebral mucomycosis (most in poorly managed diabetics), pulmonary mucormycosis (neutropenia), cutaneous mucomycosis (trauma) Control: amphotericin B or posaconazole |
pneumocystis jirovecii (formerly P. carinii) pneumocystosis |
Characteristics: complex sexual cycle, simple asexual cycle involving yeast-like trophic form Pathogenesis: transmitted by aerosols; trophozoite or sporozoite infectious form inhaled, adheres to type I epithelial cells, proliferates, and induces inflammatory exudate resulting in hypoxemia; immunosuppression required for infection Infections: pneumonia (disseminates to reticuloendothelial tissue in advance AIDS patients) Control: trimethoprim+sulfamethoxazole |
Protozoa |
(size 2-100 ?m, cytoplasm often composed of inner endoplasm [nutrition] and outer ectoplasm[organelles of locomotion]) (1) Rhizopods (amebas; reproduce by binary fission) (2) Ciliates (reproduce by binary fission) (3) Flagellates (reproduce by binary fission) (4) Sporozoans (reproduce sexually [sporogony] and asexually [shizogony]) (5) Physiology (most fac. anaerobes; heterotrophic; engulf food by pinocytosis or phagocytosis; some have specific site for ingestion [the peristome or cytostome]; many can form resistant cysts) |
Helminths |
(elongated, bilaterally symmetric, length varies from <1mm to >1m; body wall covered with cuticle; anterior end may possess suckers, hooks, teeth, etc. for attachment; all have differentiated organs [primitive nervous and excretory systems and well developed reproductive systems (1) Roundworms (nematodes; have cylindrical bodies, tubular alimentary track, and the sexes are separate) (2) Tapeworms (cestodes; have flattened bodies; the anterior end [scolex] has suckers and or hooklets for attachment; reproductive segments are called proglottids and each contains both male and female gonads; no digestive tract) (3) Flukes (trematodes; flat with branching alimentary tracts; particulate wastes are regurgitated through the mouth; have two suckers for attachment; most are hermaphroditic [except
S.mansoni)) 4) physiology (ingest or absorb body fluids, etc.; usually anaerobic respiration) |
Parasite immunity and Diagnosis |
(all aspects of the immune system important; eosinophils directed at worms; IgE made to many; acquired resistance often absent or incomplete; effector mechanisms usually directed at surface antigens of the parasite) 3. Diagnosis (direct examination of specimens [microscopy], serology [ELISA, IF, CF], molecular probes) |
Drugs for luminal protozoa (aemae, flagellates, ciliates) |
(1) Metronidazole and tinidazole (2) Nitazoxanide (for Cryptosporidium) (3) Paromomycin (4) Iodoquinol (5) Furazolidone (6) Pentamidine (7) Amphotericin B (for Naegleria and Leishmania) |
drugs for malaria |
(1) Chloroquine (2) Primaquine (3) Quinine (4) Quinidine (5) Mefloquine (6) Atovaquone/proquanil (malarone) (7) Doxycycline (8) Artesunate (for severe malaria; only available from the CDC) |
drugs for nematodes |
(1) Albendazole (2) Mebendazole (3) Pyrantel pamoate (4) Ivermectin |
drugs for flukes and tapeworms |
1) praziquantel 2) Albendazole |
Miscellaneous parasite drugs |
1) pyrimethamine/sulfadiazine (for Toxoplasma gondii) 2)Trimethoprim/sulfamethoxazole (for Cyclospora cayatamensis) |
Plasmodium |
( P. vivax, P. ovale, P. malariae, P. falciparum ) Characteristics/life cycle: sporogeny in mosquito (gametocytes, ookinete, oocyst, sporozoites), schizogony in human (sporozoite, merozoite [liver & RBC], trophozoite, schizont, gametocyte Pathogenesis: transmitted by female Anopheles ; symptoms associated with RBC rupture and proinflammatory cytokines; anemia associated with depression of marrow function; RBCs sequestered in spleen Infections: malaria: P. vivax most prevalent worldwide, invades immature RBC, may cause chronic infection; P. falciparum invades any RBC, associated with microvascular disease as a result of mature trophozoite-infected RBC adhering to microvascular endothelium Control: chloroquine, mefloquine, primaquine, atovaquone/proquanil, quinine |
Toxoplasma gondii |
Characteristics/life cycle: schizogony and sporogeny in cat GIT (trophozoites, merozoites, gametocytes), oocyst released in feces that mature to contain sporozoites; oocyst ingested by intermediate host (humans), intracellular schizogony occurs yielding tachyzoites that encyst; cyst produces sporozoites and bradyzoites that are passed in feces and infect definitive host Pathogenesis: transmitted by fecal-oral route or from ingesting undercooked infected meat; various sizes cysts occur in tissue with varying degrees of inflammation Infections: acute and chronic toxoplasmosis, congenital toxoplasmosis, toxoplasmosis in the immunocompromised Control: pyrimethamine + sulfadiazine or clindamycin |
Cryptosporidia parvum |
Characteristics/life cycle: acid fast oocysts containing 4 sporozoites ingested, sporozoites released and attach to microvilli in GIT; become schizonts that release merozoites that become gametes that mate and become oocyst that is released in the feces Pathogenesis: many animals serve as reservoirs; transmitted by fecal/oral and person to person; oocyst resistant to chlorination Infections: Cryptosporidiosis (noninflammatory, watery diarrhea); may be prolonged in immunocompromised Control: avoid contaminated water; Nitazoxanide (Alina) |
Cyclospora cayetanensis |
Characteristics/life cycle: like C. parvum but oocyts (fluoresce under UV light) contain 2 sporocysts that each contain 2 sporozoites Pathogenesis: like C. parvum except oocyts mature in the environment Infections: like C. parvum Control: trimeth-sulfameth |
Entamoeba histolytica |
Characteristics/life cycle: trophozoite with ameboid morphology; forms cyst with chromatoidal body Pathogenesis: transmitted by anal sex, fecal/oral, fomites; ingest cyst, gastric acid induces release of trophozoites, adhere to epithelial cells in colon via galactose-specific lectin, release pore-forming protein, invade, and multiply; kill epithelial cells resulting in a loss of fluid uptake and inflammatory diarrhea Infections: amebiasis (inflammatory diarrhea), may be asymptomatic (carriers), may disseminate in immunocompromised Control: metronidazole or tinidazole followed by paromomycin to eliminate cysts |
Trichomonas vaginalis |
Characteristics/life cycle: flagellate morphology (flagella, axostyle, undulating membrane); exists only as trophozoite that divides by binary fission Pathogenesis: transmitted by sexual contact; infects urethra, vagina, prostate; serious infections involve necrosis and inflammation; men mostly asymtomatic and the predominant reservoirs Infections: women: asymptomatic, vaginitis; men: asymtomatic, urethritis, prostatitis Control: safe sex; metronidazole or tinidazole |
Giardia lamblia |
Characteristics/life cycle: flagellate morphology (flagella, sucker [adhesive disk], 2 nuclei); trophozoite and cysts occur; trophozoites multiply by longitudinal binary fission Pathogenesis: transmitted by fecal/oral or contaminated food or water; ingest cyst, trophozoites released and attach to epithelial cells in duodenum; attachment induces inflammation, tissue damage, and reduce absorption Infections: acute or chronic noninflammatory diarrhea; may be asymptomatic Control: metronidazole or tinidazole |
Leishmania |
( L. tropica, L. mexicana, L. braziliensis, L. major, L. donovani) Characteristics/life cycle: hemoflagellate morphology of free-living promastigote, intracellular amastigote Pathogenesis: numerous animal reservoirs; transmitted by the bite of female sandfly; promastigote invades reticuloendothelial tissue and becomes the intracellular amastigote; replicates and invades other tissue, resulting in inflammation and necrosis Infections: cutaneous, mucocutaneous, and disseminated (visceral) leishmaniasis Control: amphotericin B or pentamidine |
Trypanosoma cruzi |
Characteristics/life cycle: epimastigote in insect gut, trypomastigote free-living in host (hemoflagellate morphology), amastigote intracellular Pathogenesis: numerous animal reservoirs; transmitted by feces of reduviid (kissing) bug; trypomastigote invades tissue, becomes intracellular amastigote that replicates and lyses cell; trypomastigote released into blood; tissue inflammation and necrosis Infections: American trypanosomiasis (Chagas’ disease) Control: nifurtimox (from the CDC)
|
Helminths: Enterobius vermicularis (pinworm) |
Characteristics: nematode morphology (cylindrical body, tubular alimentary tract, separate sexes) Pathogenesis: humans only reservoir; hand to mouth or fecal/oral transmission; ingest eggs, hatch, larvae penetrate mucosa of large intestine, mature into different sexes, mate, female lays eggs in perianal area; eggs induce allergic reaction Infections: Pinworm disease (Enterobiasis) Control: mebendazole or albendazole; pyrantel pamoate is an alternative |
Trichuris trichuria (whipworm) |
Characteristics: nematode morphology (cylindrical body, tubular alimentary tract, separate sexes) Pathogenesis: humans only reservoir; fecal/oral transmission; ingest embyonated egg, larvae penetrate mucosa of large intestine, sexes mature, mate, female releases eggs in feces; larvae develop in moist, dark environment; whip penetrates and damages mucosa; symptoms related to worm burden Infections: Whipworm disease (Tricuriasis) Control: mebendazole or albendazole |
Ascaris lumbricoides |
Characteristics: nematode morphology; worms may reach 1 m in length Pathogenesis: humans main reservoir; fecal/oral, hand to mouth transmission; ingest embyonated egg, larvae penetrate duodenal wall, enter blood then lung, grow in alveoli, coughed up and swallowed, mature in small intestine, mate, female produces eggs that are passed in feces; larvae in fertilized eggs mature in moist dark environments; symptoms related to worm burden Infections: Ascariasis Control: mebendazole or albendazole; pyrantel pamoate is an alternative |
Necator americanus |
(Ancylostoma duodenale) (Hookworm) Characteristics: nematode morphology; 2 larval morphologies (rhabditiform [free-living], filariform [infective]) Pathogenesis: transmitted by contact with contaminated soil; filariform larvae penetrate skin, enter blood, then lungs, coughed up, swallowed, attach to mucosa of small intestine, induces inflammation and necrosis; mate, eggs pass in feces, mature in soil, rhabditiforn larvae released, free-lining, develop into infective filariform larvae Infections: Hookworm disease (hypersensitive pneumonitis, GIT symptoms); cutaneous larval migrans caused by non-human hookworms Control: albendazole, mebendazole, or pyrantel pamoate |
Strongyloides stercoralis |
Characteristics: like
Necator Pathogenesis: transmitted by contact with contaminated soil; filariform larvae penetrate skin, enter blood, then lungs, coughed up, swallowed, mate in small intestine, males ejected, female burrow into mucosa and produce eggs; hatch liberating rhabditiform larvae, some pass in feces, some develop into filariform and continue the infection; pathogenesis dependent on worm burden Infections: Strongyloidiasis (acute [hypersensitive pneumonitis, GIT asyptomatic to inflammatory diarrhea], hyperinfection syndrome in immunocompromised) Control: ivermectin or albendazole |
Toxocara canis (and T. cati) |
Characteristics: eggs of non-human ascarid hatch in GIT and undergo limited development Pathogenesis: ascarids migrate into tissue; symptoms and pathogenesis related to migration (eosinophilia and hepatomegaly common) Infections: Toxocariasis (Visceral larva migrans); Ocular larval migrans associated with infection by larvae Control: usually self-limited; albendazole or mebendazole for severe disease |
Trichinella spiralis (T. murrelli) |
Characteristics: nematode morphology Pathogenesis: many reservoirs ( T. spiralis worldwide, T. murrelli in North American bears); transmitted by eating undercooked meat; ingest cyst, larvae released, develop in intestinal mucosa of small intestine (intracellular parasites), mature, mate, females produce larvae that enter the blood, then muscle where the coil and encyst; pathogenesis depends on worm burden; myositis and vasculitis occur Infections: Trichinosis (symptoms depend on worm burden and location of cysts) Control: mebendazole or albendazole stops development of new larvae |
Taenia (T. saginata, T. solium) |
Characteristics: cestode morphology and life cycle (proglottids, scolex, resistant cuticle) Pathogenesis: pig ingests embryophores, cattle ingest gravid proglottids and embyonated eggs, larvae liberated in intestine, enter blood then muscle; humans eat undercooked meat containing cysticerci, scolex attaches to mucosa of small intestine, worms mature, eggs and gravid proglottids released in feces; dead end when human ingests T. solium embryophore (Cysticercosis) Infections: tapeworm disease (GIT symptoms depend on worm burden); Cysticercosis when T. solium embryophore is ingested Control: avoid undercooked meat; praziquantel or niclosamide |
diphyllobothrium latum (freshwater fish tapeworm) |
Characteristics: cestode morphology; crustaceans and fish intermediate hosts; prevalent in cool lake water Pathogenesis: humans ingest undercooked fish infected with sparganum larvae, attach to mucosa of small intestine, mature, eggs in feces, eggs released into freshwater develop into coracidium that infects crustaceans Infections: Fish tapeworm disease (GIT symptoms depend on worm burden) Control: praziquantel or niclosamide |
Schistosoma mansoni (blood fluke) |
Characteristics: trematode morphology; unlike most trematodes sexes are separate; eggs have characteristic lateral spine; adults are obligate intravascular parasites; aquatic snail intermediate host Pathogenesis: cercaria penetrate skin, enter blood, develop in portal circulation (inferior mesenteric vein near lower colon), coat themselves with host proteins, mate, eggs produced; eggs pass into GIT and released in feces Infections: Schistosomiasis (blood fluke infection; hypersensitive skin reaction at sites of skin penetration; hepatic and GIT symptoms depend on worm and egg burden) Control: praziquantel |
Miscellaneous parasites |
A. Echinococcus (dog tapeworm; human infection results in cysts in lung and liver) B. Babesia (intraerythrocytic protozoan transmitted by same tick that transmits Lyme disease; malaria-like syndrome) C. Naegleria fowleri (amebic meningoencephalitis) D. Baylisascaris procyonis (raccoon roundworm; causes visceral, ocular, and neural larval migrans in humans) |
Ectoparasites |
A. Sarcotes scabiei (itch mite; scabies in humans, mange in animals) B. Pediculus humanus (body or head louse) C. Phthirus pubis (crab louse) D. Cimex hemipterus (bed bugs) |