AP Biology- Biochemistry – Flashcards

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ionic bond
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bond resulting from a transfer of electrons
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covalent bond
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bond resulting from the sharing of electrons
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nonpolar
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electrons shared equally
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polar
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electrons shared unequally
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buffer
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substance that resists changes in pH
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bicarbonate ion
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most important buffer in human blood
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isomer
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organic compounds with the same molecular formula but different structure
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structural isomer
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isomer differing in the arrangement of atoms
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geometric isomer
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isomer differing in the spacial arrangement of double bonds
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optical isomers
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isomers that are mirror images of each other
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enantiomer
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synonym for optical isomer
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monosaccharide
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C6H12O6 simple sugar; glucose, galactose, and fructose
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disaccharide
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two monosaccharides joined together; C12H22O1; maltose, lactose, and sucrose
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dehydration synthesis
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condensation; joining compounds together with water released
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hydrolysis
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breakdown of a compound by adding water
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polysaccharide
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polymers of carbohydrates
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cellulose
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structural polysaccharide that makes up plant cell walls
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starch
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storage polysaccharide found in plants
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amylose
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simplest storage polysaccharide form of starch
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amylopectin
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more complex storage polysaccharide form of starch
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chitin
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structural polysaccharide found in animals; makes up the exoskeleton in arthropods
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glycogen
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storage polysaccharide animal starch that in humans is stored in the liver and the skeletal muscle
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glycerol
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alcohol portion of a lipid
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fatty acid
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hydrocarbon chain with a carboxyl group at one end; majority portion in lipids
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saturated fat
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fat without double bonds
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unsaturated fat
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fat with double bonds
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steroid
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lipid with a four fused ring structure; cholesterol and testosterone
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peptide bond
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bond creating amino acid chains or polymers
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conformation
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protein's unique shape that determines its function
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primary structure
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linear sequence of amino acids; peptide bonds
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secondary structure
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protein formed with hydrogen bonds
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tertiary structure
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3D conformation formed; determines specificity
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quaternary structure
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protein with more than one polypeptide chain
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alpha helix
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secondary structure form of a protein; human hair (keratin)
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beta pleated sheet
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secondary structure form of a protein; spider webs and silk
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fibrous proteins
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proteins that exhibit secondary structure; wool, claws, beaks, reptile scales, collagen, and ligaments
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heme group
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one of four polypeptide chains in the quaternary structure of hemoglobin
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protein folding problem
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how proteins form their unique shapes
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chaperone proteins
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molecules that assist in folding other proteins
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functional group
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components of organic molecules most often involved in chemical reactions
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metabolism
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sum of all chemical reactions that take place in cell
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catabolism
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reaction that breaks down molecules
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anabolism
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reaction that creates molecules
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enzyme
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catalytic protein that lowers a reaction's energy of activation
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induced fit model
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enzyme model where the substrate induces the enzyme to alter its shape slightly so it fits better
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cofactor
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inorganic enzyme assist
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coenzyme
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organic enzyme assist (vitamins)
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competitive inhibition
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compounds that look like the normal substrate compete for the same active site on the enzyme
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noncompetitive inhibition
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more than one active site and the substrates do not look like each other
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allosteric inhibition
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two active sites, one for a substrate and one for an inhibitor
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feedback inhibition
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metabolic pathway is switched off by the end product; allosteric inhibition
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cooperativity
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substrate stimulating an enzyme with quaternary structure to be more effective
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cohesion
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capacity to resist tension to rupture
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alkaline
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synonym for basic
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salt
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compound that releases ion other than H+ or OH- when dissolved in water
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phosphorylation
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any phosphate group transfer
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chemical equilibrium
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when the reaction rate is about the same in either direction
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polymer
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long molecule consisting of many similar or identical monomers linked together
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monomer
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building block for polymers; only made by producers
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adhesion
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attraction between different kinds of molecules
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surface tension
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measure of how difficult it is to stretch or break the surface of a liquid
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van der Waals interactions
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tertiary structure; weak attractions between molecules or parts of molecules that result from localized charge fluctuations
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emergent properties
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new properties that arise with each step upward in the hierarchy of life due to the arrangement and interactions of parts as complexity increases
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evaporative cooling
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property of a liquid where the surface becomes cooler during evaporation due to the loss of molecules
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hydration shell
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sphere of water molecules around each dissolved ion
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disulfide bridge
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tertiary structure; strong covalent bond formed when one sulfur of one cysteine monomer bonds to the sulfur of another
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hydrophobic interaction
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tertiary structure; weak chemical bond formed when molecules that do not mix with water change to exclude the water
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hydrocarbon
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organic molecule consisting of only hydrogen and carbon
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macromolecule
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giant molecule formed by the joining of smaller molecules
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glycosodic linkage
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covalent bond formed between two monosaccharides by a dehydration synthesis reaction
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nucleotide
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building block of a nucleic acid; five carbon sugar covalently bonded to a nitrogen base and a phosphate group
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pyramidine
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cytosine, thymine, and uracil; six-membered ring
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purine
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adenine and guanine; six-membered ring fused to a five-membered ring
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triose
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three carbon sugar
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pentose
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five carbon sugar
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hexose
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six carbon sugar
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hydroxyl
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hydrogen bonded to oxygen bonded to an organic molecule's carbon skeleton; alcohol; polar
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carbonyl
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carbon double bonded to oxygen; ketones and aldehydes
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carboxyl
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oxygen double bonded to a carbon atom that is bonded to a hydroxyl group
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amine
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nitrogen bonded to two hydrogens and to the carbon skeleton
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sulfhydryl
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sulfur bonded to hydrogen in roughly the shape of a hydroxyl; cysteine
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phosphate
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phosphorous bonded to four oxygens, two have negative charges, one is bonded to the carbon skeleton; phospholipid
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methyl
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carbon bonded to three hydrogens; arrangement determines function of male and female sex hormones
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