Brady Test 1 Review – Flashcards

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Heterotrophs
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Can't Make own food

ex. bunnies, people

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Saprophytes
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Eat Dead/ Rotting Organisms

ex. fungi/ bacteria

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Nitrogen Cycle (Order)
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Nitrogen Gas

Ammonia

Nitrite

Nitrate

Amino Acids/ Proteins

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Bacteria That Fix Nitrogen
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Rhizobium, Azotobacter, Rotospirillium
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Rhizobium
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An important nitrogen fixing bacteria
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Sulfur Cycle (in order)
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Hydrogen Sulfide

Sulfur

Sulfite

Sulfate

Amino Acids/ Proteins

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Sulfur-Changing Bacteria Examples
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Thiobacillus, Desulfovibrio, Beggiatoa
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Bacteria that do the sulfur cycle backwards (take amino acids and make Hydrogen Sulfide)
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Proteus vulgaris, Salmonella typhi
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Methods of Organization
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Phenetic

Phylogenetic

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Phenetic
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Classification by what they look like

Shape, size, morphology

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Phylogenetic
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 Classifying with differences such as:

 

uses genetic material such as tRNA and rRNA

Composition of DNA

Differences in cell membrane lipid structure

Cell wall structure

Antibiotic Sensitivity

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The Domains
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Eucarya

 

Bacteria

 

Archea

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Domain Eucarya
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have nuclear membranes

 cell walls if present are made of cabohydrates

Not sensitive to antibiotics

ribosomes are different

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Bacteria Domain
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Prokaryotic organisms

cell walls = peptidoglycan

no nuclear membrane

sensetive to antiobiotics

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Archaea Domain
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Prokaryotic

cell walls not peptidoglycan

Extreme environments (halophiles, methanogens, hypothermophiles)

not sensitive to antibiotics

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Peptidoglycan
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Its in cell walls of bacteria
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Strain Types
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Biovar

 

Morphovar

 

Serovar

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Biovar
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strain with biochemical and physiological differences; diff proteins and enzymes
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Morphovar
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stain with differences in shape and physical

 

there are strains that have color pigment or lack it

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Serovar
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varient in prokaryotic strains due to antigen differences
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Levels of Organization (starting with Domain)
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Domain

Kingdom

Phylum

Class

Order

Family

Genus - Cap

species - lower case

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Methods for Studying microbes
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Inoculation

 

Incubation

 

Isolation

 

Inspection

 

Identification

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Inoculation
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taking a small sample, putting it on growth media
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Incubation
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growing the sample under best circumstances
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Isolation
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Separating microbes to form pure colonies
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Inspection
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examining colonies and cells
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Identification
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putting them in the right groups so you can name them
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Inoculum
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term for small sample of a microbe
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Medium / Media
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substance which contains nutrients for the growth of the inoculum
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Turbidity
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cloudiness in liquid media
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Fastidius
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Picky
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Fastidius Heterotroph Examples
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Legionella

 

Bordetella pertussis

 

Helicobacter pylori

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Parasite
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lives in or on other living things
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Obligate Parasite
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Cannot survive outside a living thing

 

"Harder to catch"

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Facultative Parasite
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A parasite that can survive outside a host
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Methanogenesis
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process done by certain autotrophs

create methane gas

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Autotrophs
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create their own food
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Extreme dehydration (of a microbe)
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the microbe goes down to 20% water

 

(leaves them dormant)

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Obligate Halophiles
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microbe that must have high salt levels

 

ex. Halobacterium

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Facultative halophiles
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can tolerate salt levels (Halotolerent)
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Facultative parasite/ halophile example. can stand extreme pH too, also saccrotolerent
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Staph
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Saccrophile
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needs high levels of sugar
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Acidophiles
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need low pH

 

ex. Helicobacter pylori, Euglena mutabilis

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Alkalinophiles
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Like Higher pH
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Methods of classifying growth media
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Physical types

 

Origin

 

Function

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Broth
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liquid medium
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Plate, Slant, Deep
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Solid Media
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Gel
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Semisolid Medium
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Physical Media Types
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Broth

Solid

Gel

Living Media

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Media types based on origin
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natural

 

synthetic

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Funtional types of media
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Nutrient

Enriched

Selective

Differential

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Plate
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Solid medium in a petri plate
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Slant
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Solid medium in a test tube
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Living media
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used for examining viruses and microbes like syphilis and leprosy

ex. chick embryos and experimental animals

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Natural Media / Nonsynthetic
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comes from natural sources, exact composition of the medium is not always known

 

Blod, tomato, animal extracts, milk agar

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Synthetic Medium / Minimal medium
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Completely man made medium, composition strictly controlled

ex. Simmon's Citrate medium only has one sugar in it

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Enriched Media
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Grow fastidius heterotrophs

Heat labile - destroyed by heat

Blood agar, Thayer-Martin agar, Milk Agar

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Heat Labile Media Type
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Enriched Media
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General Purpose media examples
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Nutrient Agar/ broth

Brain Heart Infusion

Trypticase Soy Agar

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Peptone
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buffer to maintain a constant pH in general purpose media
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Acts as a buffer in general purpose media
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Peptone
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Selective media
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So microbes will grow, some will not

ex. EMB, MSA

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EMB (Eosin Methylene Blue)
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Selective -  crystal violet kills gram positives

Differential - lactose fermenters (E. coli)

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MSA Manntiol Salt Agar
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Selective - high salt concentrations so Staphylococci and Halophiles can grow

Differential - Staph. aureus will cause the medium to change yellow

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Differential media
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provides visible diff between organisms, color
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Phases of Microbial Growth / Disease Path
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Lag

Log (Exponential)

Plateu

Log (Death)

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Generation Time
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Time required for a cell to divide

20min for E. coli

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Factors that affect microbial growth
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Temperature

 

Oxygen Requirements

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Psychrophiles
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like cold

0-15'C

ex. Psychrobacter

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Facultative psychrophile/ psychrotroph
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can grow in refrigeration and have an optimum temperature of 20'C-30'C
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Mesophile
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between 20'C and 40'C

pathogens

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Theromophiles
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Grow at above 50'C

ex. Thermous aquaticus

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Aerobes
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Need Oxygen for metabolism

ex. Micrococcus and Pseudomonas

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Obligate anaerobes
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Cannot tolerate Oxygen

ex. Clostridium sporogenes

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Clostridium sporogenes
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Obligate anaerobe
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Examples of Aerobes
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Micrococcus and Pseudomonas
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Facultative anaerobes
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Can tolerate Oxygen

ex. E. coli

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Microaerophiles
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Requires small amounts of Oxygen

ex. Treponema pallidum (syphillis)

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Treponema pallidum
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Microaerophiles

Syphillis

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Capnophiles
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grow best at a higher carbon dioxide tension than normally in the atmosphere
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Axenic
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pure culture
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Isolation methods
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Streak plate

Dilution

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Maintaining / Preserving Cultures
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Periodic Transfer

Preservation under oil

Lyophilization

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Lyophilization
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Freeze dry the microbe
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strepto-
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chain of cocci or bacilli
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sarcina
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cube of 8 cocci
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Staphylo
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Grape like cluster of cocci
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3 Shapes of bacteria
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Coccus

Bacillus

Spirillium

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Coryne
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club shaped bacilli
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Spirochete
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long, slender spiral
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Vibrio
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bent rod
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Reasons to Negative Stain
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Accurate size of cell

May reveal capsule

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Capsule functions
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Protect from: dehydration

phagocytosis by WBCs

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Magnesium Ribonucleate
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in Gram +
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Characteristics of Gram +
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Has MgRNA

sensitive to crystal violet, no EMB growth

sensitive to penicillin

can form spores

produces exotoxins which leave the cell

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Characteristics of Gram -
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No MgRNA

Not sensitive to crystal violet, grows on EMB

not senstitive to penicilin

non spore formers

produce endotoxins which arent released

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