Bio test 3 Lecture 22 – Flashcards
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The nucleolus
-is surrounded by a thin nucleolar membrane.
-is found, one per cell, in eukaryotes.
-contains the NOR of rRNA genes.
-synthesizes ribosomal proteins.
-all of the above
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contains the NOR of rRNA genes.
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DNA replication is highly accurate. It results in about one mistake per billion nucleotides. For the human genome, how often would errors occur?
-on average, once a lifetime in 10 percent of the population
-on average, once every six cell divisions
-on average, six times each time the entire genome of a cell is replicated
-on average, once or twice in the lifetime of an individual
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on average, six times each time the entire genome of a cell is replicated
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The epsilon (ε) subunit of DNA polymerase III of E. coli has exonuclease activity. How does it function in the proofreading process? The epsilon subunit _____.
-excises a segment of DNA around the mismatched base
-adds nucleotide triphosphates to the 3' end of the growing DNA strand
-can recognize which strand is the template or parent strand and which is the new strand of DNA.
-removes a mismatched nucleotide
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removes a mismatched nucleotide
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Which of the following statements about rRNA is/are correct? Choose all that apply.
-RNA Polymerase II transcribes the 5S rRNA genes.
-The tandem arrays of 5S rRNA genes are located in an NOR.
-The 45S pre-rRNA transcript is processed by complexes of RNA and protein known as snoRNPs.
-The 45S and 5S rRNA genes are located on chromosomes 13, 14, 15, 21 and 22.
-No productive association of the small and large ribosomal subunits occurs until the subunits are exported into the cytoplasm.
-The 45S rRNA genes have very strong promoters for optimal transcription.
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The 45S pre-rRNA transcript is processed by complexes of RNA and protein known as snoRNPs.
No productive association of the small and large ribosomal subunits occurs until the subunits are exported into the cytoplasm.
The 45S rRNA genes have very strong promoters for optimal transcription.
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Which of the following is least likely to be found in the dense fibrillar region of the nucleolus?
-18S rRNA
-Ribosomal proteins
-5.8S rRNA
-28S rRNA
-Pre-ribosomal particles
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Pre-ribosomal particles
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Which one of the following is least likely to cause mutations in DNA?
-ultraviolet radiation from sunlight
-aflatoxins that are found in moldy grains
-light from an incandescent bulb
-hydroxyl radicals formed as by-products of aerobic respiration
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light from an incandescent bulb
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Which of the following statements about mutations is incorrect?
-Proofreading by DNA polymerases helps reduce a cell's observed frequency of mutation.
-Mistakes in transcription lead to alterations in the nucleotide sequence in the DNA.
-If a mutation occurs in a bacterial cell, all subsequent progeny cells will carry that mutation.
-If a mutation occurs in a germ line cell, the resulting fertilized embryo will carry the mutation in every cell.
-Mistakes in translation are not as critical as mistakes in replication.
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Mistakes in transcription lead to alterations in the nucleotide sequence in the DNA.
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Which of the following statements about mutations is/are incorrect? Choose all that apply.
-Mutations arise from sources other than just mistakes made during DNA replication.
-DNA replication machinery generates errors at a lower rate than RNA transcription machinery.
-Mistakes in transcription are not as critical as mistakes in replication.
-Germ-line mutations can be passed down to offspring.
-Somatic mutations are often passed down to offspring.
-Mistakes in DNA replication do not lead to heritable mutations.
-Mutations in RNA during transcription are not inherited by daughter cells over multiple generations.
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Somatic mutations are often passed down to offspring.
Mistakes in DNA replication do not lead to heritable mutations.
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The nucleus is the site for
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ribosomal RNA (rRNA) synthesis
rRNA processing (not splicing)
assembly of ribosomal subunits
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RNA polymerase III
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performs transcription of 5S
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TFIID
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transcription factor II D is for RNA polymerase II
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snRNPs
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used for splicing
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eukaryotic ribosomes consist of
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4 types of ribosomal RNA: 5S, 5.8S, 18S, 28S
about 75 different proteins
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active mammalian cells have 5-10 million ribosomes that must be synthesized each time the cell divides, so
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cells have multiple copies of their rRNA genes
about 280 copies of 5.8, 18, and 28 and 2000 copies of 5 (bc most of these are pseudo genes and don't work)
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tandem arrays of genes for 5.8S, 18S, and 28S rRNAs are transcribed by
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RNA polymerase I, which creates the primary transcripts (pre-mRNA)
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45S gene arrays
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will be processed into 5.8S, 18S, and 28S rRNA
they are found on 5 different chromosomes: 13, 14, 15, 21, 22
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5S gene
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found in huge array on chromosome 1
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the nucleolus
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forms around the arrays of 45S rRNA genes, which are therefore called NORs
if not actively transcribing 45S and 5S genes, there will not be a nucleolus
contains fibrillar region (center), dense fibrillar region, and granular zone- transcription, processing, and assembly occurs in these regions
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NORs
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nuclear organizing regions, consisting of 45S gene
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fibrillar region/center
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transcription of rRNA occurs here
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dense fibrillar region
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processing of pre-rRNA occurs here
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granular zone
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assembly of pre-ribosomal particles occurs here
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mutations
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heritable changes in DNA
in single-cell organisms, all daughter cells get mutation
in multi-cell organisms, mutations can be somatic (non-sex-cell, passed to daughter cells in area) or germline (sex cell, passed to new organism)
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gene-
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mutated form of gene
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gene+
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wildtype, non-mutated form of gene
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DNA polymerase
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adds incorrect base 1 in every 100,000 bps added
the E subunit of enzyme acts as exonuclease and removes the incorrect bp, leaving only 1 mistake for each 10 million bps added
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mismatch repair
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10 proteins recognize mistakes leftover by DNA polymerase during replication and excise segment containing mistake
they recognize the correct strand by chemical signals it has
leaves only 1 mistake per billion nucleotides
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damage to DNA can be done by
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sunlight (UV rays), X-rays, chemicals (hydroxyl radicals, aflatoxin B1, and benzo[a]pyrene)
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nucleotide excision repair
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enzyme recognized misshapen DNA and removes segment and DNA polymerase and ligase create new segment and seal it in