Specimens (general) Respiratory Org. – Flashcards

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What is the normal cut-off time for specimen collections?

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2 hours

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What should be indicated on the label of  specimens?

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  1. Name
  2. Date and time of collection 
  3. Patien ID number/ or hospital number 
  4. Source 
  5. Type of collection
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What is the transport media Carey-Blair typically used for?

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good for stool cultures or specimens that need to be held for extended period of time (mailing etc..)
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What is the transport media Amies typically used for?

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Good for Neisseria gonorrhea
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What is the transport media Stuarts typically used for ?

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supports transport of almost all pathogens
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What is the transport media JEMBEC typically used for?

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for genital cultures that cant get to the lab in a timely fashion

 

Specifically looking for N. gonorrhoeaa

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Mouth cultures are not routinely processed-will grow URF, what is the exception?

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Mycology cultures may be performed to rule out THRUSH (Candida albicans)

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What are you looking for in throat cultures?

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Primarily used for the detection of Group A beta-hemolytic streptococci (cause of strep throat)
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If group A strep is left untreated...sequelae include...

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Rheumatic Fever and Glomerulonephritis
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What do type of agar do you plant throat cultures on?
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BAP - streak for isolation

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Group A rapid tests are commonly performed for throat cultures, but what is the problem with them?

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Rapid tests are specific, but not sensitive...A Negative rapid test MUST be confirmed by culture
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Nasopharyngeal cultures are not routinely done, if performed they are by request and only to screen for carriers of.....

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S. aureus

N. meningitidis

H. influenzae

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What are the steps to Nasopharyngeal cultures?
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  1. Plant on BAP (STAX)/ Choc
  2. Incubate in increased CO2
  3. Special Circumstances- use Calcium alginate swab on thin nichrome wire (C. diptheriae B. pertussis)

 

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What is a Nares culture usually used for?

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to rule out MRSA
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What are the types of Lower Respiratory Specimens?
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Expectorated Sputum

Suctioned Sputum  (leukens tube)

Bronchoscopy specimen or bronchial washing  (BAL)

Bronchial Brushing 

Transtracheal Aspirate 

Lung Aspirate 

Lung Biopsy

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LRT specimen processing begins with...
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Gram Stain 

Calulate Q-Score 

If acceptable quality..process specimen

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For the Q-score, sputum is evaluated at low power (10x) and neutrophils and squamous cells are graded...how many cells for a score of 0, 1, 2, or 3?
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  • No cells= 0
  • 1-9= 1
  • 10-24= 2
  • >25= 3
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What plates do you innoculate when you have an acceptable quality Lower resp specimen??

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BAP, MAC, and CHOC
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After BAP and MAC cultures of Lower Resp specimens have grown....whats next?

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Add STAX to BAP

 

If both GN and GP appear in significant numbers...add CNA or PEA

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For Lower Resp Specimens...when do you report "Pneumo"

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when you see pairs of GP diplococci, sometimes lancet shaped, encapsulated, or with blotchy appearence,

>25 pairs/oil immersion field (OIF)

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For Lower Resp Specimens...when do you report "Staph"
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GP cocci in clusters 

>25/Oil immersion field 

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For Lower Resp Specimens....when do you report "yeasts"
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at least one yeast cell with pseudohyphae/OIF
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For Lower Resp Specimens..when do you report "Enteric/Psuedomonas"
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GNB >10/OIF
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For Lower Resp Specimens...when do you report "Bacteriodes/ Hemophilus" (B/H)
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GN coccobacilli/pleomorphic > 10 /OIF
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For Lower Resp Specimens...when do you report "Branhamella/Acinetobacter"
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Plump GN diplococci >25/OIF
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What are the most common pathogens of the Upper and Lower Respiratory Tract?
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Strep pneumoniae

Haemophilus influenzae

Klebsiella pneumoniae and other Enterobacteriaceae

Pseudomonas aeruginosa and other "Pseudomonads"

Legionella pneumophila

Candida albicans (Thrush)

Acinetobacter spp.

Moraxella (Branhamella) catarrhalis 

Beta-hemolytic streptococci

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What are the "other" respiratory pathogens which require specialized media for isolation?

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Corynebacterium diphtheriae

Mycobacterium tuberculosis and other Mycobacterium spp.

Bordetella pertussis 

Nocardia asteriods 

Mycoplasma pneumoniae

Chlamydia pneumoniae and other spp 

Pneumoncystis carinii 

Viruses ( CMV, HSV, Adeno, Influenza, etc)

Fungi including Histoplasma capsulatum and others 

Anaerobes (Prevotella melaninogenicus, Fusobacterium nucleatum etc.)

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What are the organisms considered normal upper respiratory flora? (URF)

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Alpha and gamma hemolytic Streptococcus 

Staphylococcus spp (NOT aureus)

Neisseria spp (NOT meingiditis)

Corynebacterium spp (NOT diphtheriae)

Many anaerobes 

Candida spp.

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What organisms are isolated in the URT of hospitalized patients and is usually not reported unless its a chemo patients?

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Klebs. pneumoniae

Ps. aeruginosa

Other Enterobacteriaceae 

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What are the causative organisms of Vincents Angina (Trench Mouth)

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Borrelia vincentii (a.k.a. Bacteriodes denticola/Prevotella)

 

Fusobacterium nucleatum (now Fusobacterium necrophorum)

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In Vincents Angina (Trench mouth) what organisms predominate in the acute cases? Chronic cases?

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Acute: Spirochetes

Chronic: Fusiform

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How are samples of Trench mouth tested in lab?

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Direct smear with Z/N or crystal violet

 

ALOT of Spirochetes and Fusiforms will be seen

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What are the most likely organisms in otitis media infections?
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Stp pneumoniae (25-50%)

Hem. influenzae (15-30%)

Mor. cararralis (3-20%)

Stp. pyogenes (2%)

Sth. aureus (1%)

Enterobacteriaceae (1%)

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What are the most likely organisms in Otitis Externa infections?
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Ps. aeruginosa 

Sth. aureus 

Other aerobic bacteria

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What skin contaminants are not significant in otitis media samples?

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Sth. epidermidis 

Diphtheroids

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A Nasopharyngeal swab is used in suscpected cases of...
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Neisseria meningitidis

Bordetella pertussis

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Chronic Granulomatus infection of nasal passages is due to the infection of what organism?
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Klebs rhinoscleromatis
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chronic mucopurulent nasal discharge, foul smelling, due to secondary low grade anaerobic infection of what organism?
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Klebs. ozanae
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What is the expected flora of the nasopharyngeal?
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Neisseria spp 

alpha/gamma strep

Haemophilus spp

Diphtheroids

Anaerobic Bacteria 

Strep pneumoniae

Staph

small amounts of GNB (as hospitlization increase..so does GNB)

small number of yeasts

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